Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC107016.1-201ENST00000550463 337 ntBASIC3.98□□□□□ -1.77
UPK1AO00322 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
UPK1AO00322 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC3.98□□□□□ -1.77
UPK1AO00322 MIR5096-201ENST00000583713 70 ntBASIC3.98□□□□□ -1.77
UPK1AO00322 AC104785.1-201ENST00000603220 588 ntBASIC3.98□□□□□ -1.77
UPK1AO00322 AC008745.1-201ENST00000604064 271 ntBASIC3.98□□□□□ -1.77
UPK1AO00322 AL356218.2-201ENST00000605264 187 ntBASIC3.98□□□□□ -1.77
UPK1AO00322 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC3.98□□□□□ -1.77
UPK1AO00322 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.98□□□□□ -1.77
UPK1AO00322 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.98□□□□□ -1.77
UPK1AO00322 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.98□□□□□ -1.77
UPK1AO00322 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
UPK1AO00322 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.98□□□□□ -1.77
UPK1AO00322 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
UPK1AO00322 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
UPK1AO00322 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
UPK1AO00322 AL133243.3-201ENST00000617415 3004 ntBASIC3.97□□□□□ -1.77
UPK1AO00322 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC3.97□□□□□ -1.77
UPK1AO00322 GHR-202ENST00000357703 4316 ntTSL 5 BASIC3.97□□□□□ -1.77
UPK1AO00322 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.97□□□□□ -1.77
UPK1AO00322 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC3.97□□□□□ -1.77
UPK1AO00322 AC053481.2-202ENST00000582394 1500 ntBASIC3.97□□□□□ -1.77
UPK1AO00322 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
UPK1AO00322 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
UPK1AO00322 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
UPK1AO00322 RNU4-39P-201ENST00000362455 127 ntBASIC3.97□□□□□ -1.77
UPK1AO00322 AC019155.1-201ENST00000382242 574 ntBASIC3.97□□□□□ -1.77
UPK1AO00322 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
UPK1AO00322 U3.22-201ENST00000391120 215 ntBASIC3.97□□□□□ -1.77
UPK1AO00322 ZNF603P-201ENST00000405613 487 ntBASIC3.97□□□□□ -1.77
UPK1AO00322 RN7SKP235-201ENST00000410662 305 ntBASIC3.97□□□□□ -1.77
UPK1AO00322 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC3.97□□□□□ -1.77
UPK1AO00322 VDAC1P6-201ENST00000430062 855 ntBASIC3.97□□□□□ -1.77
UPK1AO00322 AL357520.1-201ENST00000441557 453 ntBASIC3.97□□□□□ -1.77
UPK1AO00322 CEACAMP9-201ENST00000442990 513 ntBASIC3.97□□□□□ -1.77
UPK1AO00322 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.97□□□□□ -1.77
UPK1AO00322 CYCSP42-201ENST00000450823 238 ntBASIC3.97□□□□□ -1.77
UPK1AO00322 RN7SL691P-201ENST00000494487 301 ntBASIC3.97□□□□□ -1.77
UPK1AO00322 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
UPK1AO00322 AP001960.1-201ENST00000506494 658 ntBASIC3.97□□□□□ -1.77
UPK1AO00322 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
UPK1AO00322 AL592156.1-201ENST00000508758 304 ntBASIC3.97□□□□□ -1.77
UPK1AO00322 AC109458.1-201ENST00000508858 316 ntBASIC3.97□□□□□ -1.77
UPK1AO00322 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.97□□□□□ -1.77
UPK1AO00322 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.97□□□□□ -1.77
UPK1AO00322 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.97□□□□□ -1.77
UPK1AO00322 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC3.97□□□□□ -1.77
UPK1AO00322 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.97□□□□□ -1.77
UPK1AO00322 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.97□□□□□ -1.77
UPK1AO00322 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.97□□□□□ -1.77
UPK1AO00322 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.97□□□□□ -1.77
UPK1AO00322 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.97□□□□□ -1.77
UPK1AO00322 AC095038.2-201ENST00000621464 1070 ntBASIC3.97□□□□□ -1.77
UPK1AO00322 AC015722.2-201ENST00000622210 551 ntBASIC3.97□□□□□ -1.77
UPK1AO00322 AP003497.2-201ENST00000624220 967 ntBASIC3.97□□□□□ -1.77
UPK1AO00322 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.97□□□□□ -1.77
UPK1AO00322 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
UPK1AO00322 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
UPK1AO00322 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC3.97□□□□□ -1.77
UPK1AO00322 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.96□□□□□ -1.77
UPK1AO00322 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
UPK1AO00322 AC107021.2-201ENST00000567714 2095 ntBASIC3.96□□□□□ -1.77
UPK1AO00322 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
UPK1AO00322 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.96□□□□□ -1.78
UPK1AO00322 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
UPK1AO00322 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
UPK1AO00322 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
UPK1AO00322 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
UPK1AO00322 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
UPK1AO00322 RNU1-14P-201ENST00000362759 152 ntBASIC3.96□□□□□ -1.78
UPK1AO00322 RNA5SP509-201ENST00000364577 119 ntBASIC3.96□□□□□ -1.78
UPK1AO00322 RNA5SP36-201ENST00000410197 133 ntBASIC3.96□□□□□ -1.78
UPK1AO00322 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.96□□□□□ -1.78
UPK1AO00322 RPL6P29-201ENST00000414863 865 ntBASIC3.96□□□□□ -1.78
UPK1AO00322 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.96□□□□□ -1.78
UPK1AO00322 P2RY10P2-201ENST00000416730 913 ntBASIC3.96□□□□□ -1.78
UPK1AO00322 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.96□□□□□ -1.78
UPK1AO00322 AC092647.1-201ENST00000420654 287 ntBASIC3.96□□□□□ -1.78
UPK1AO00322 MTCO1P51-201ENST00000427672 1060 ntBASIC3.96□□□□□ -1.78
UPK1AO00322 MTCO1P54-201ENST00000430139 712 ntBASIC3.96□□□□□ -1.78
UPK1AO00322 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.96□□□□□ -1.78
UPK1AO00322 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.96□□□□□ -1.78
UPK1AO00322 RPS3AP54-201ENST00000435535 734 ntBASIC3.96□□□□□ -1.78
UPK1AO00322 CBX1P1-201ENST00000440184 427 ntBASIC3.96□□□□□ -1.78
UPK1AO00322 EEF1A1P1-201ENST00000447052 739 ntBASIC3.96□□□□□ -1.78
UPK1AO00322 MTND2P25-201ENST00000449028 610 ntBASIC3.96□□□□□ -1.78
UPK1AO00322 AL133477.1-201ENST00000457472 514 ntBASIC3.96□□□□□ -1.78
UPK1AO00322 AC011276.1-201ENST00000469688 323 ntBASIC3.96□□□□□ -1.78
UPK1AO00322 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.96□□□□□ -1.78
UPK1AO00322 RPL35P6-201ENST00000490024 372 ntBASIC3.96□□□□□ -1.78
UPK1AO00322 RNA5SP49-201ENST00000516450 115 ntBASIC3.96□□□□□ -1.78
UPK1AO00322 RNA5SP519-201ENST00000516480 119 ntBASIC3.96□□□□□ -1.78
UPK1AO00322 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.96□□□□□ -1.78
UPK1AO00322 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.96□□□□□ -1.78
UPK1AO00322 CR383656.6-201ENST00000550518 394 ntBASIC3.96□□□□□ -1.78
UPK1AO00322 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.96□□□□□ -1.78
UPK1AO00322 HMGB3P26-201ENST00000560051 582 ntBASIC3.96□□□□□ -1.78
UPK1AO00322 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC3.96□□□□□ -1.78
UPK1AO00322 FAM27D1-201ENST00000612308 341 ntBASIC3.96□□□□□ -1.78
UPK1AO00322 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms