Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 AL162151.2-201ENST00000448875 158 ntBASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 OTX2P1-201ENST00000450956 354 ntBASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 AC005008.1-201ENST00000456151 612 ntBASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 AC068228.1-201ENST00000461723 211 ntBASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 TPT1P3-201ENST00000492841 512 ntBASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 RN7SKP99-201ENST00000517028 307 ntBASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 OR4R3P-201ENST00000525084 838 ntBASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 RPL21P7-201ENST00000557463 483 ntBASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 SNRPGP15-201ENST00000600149 222 ntBASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 AC025946.2-201ENST00000603398 234 ntBASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 AC087283.1-201ENST00000604029 1074 ntBASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 MIR6721-201ENST00000617181 87 ntBASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 AC009237.17-201ENST00000618111 748 ntBASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 RN7SKP104-201ENST00000362605 328 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 RNU1-83P-201ENST00000363426 164 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 RNU6-354P-201ENST00000383862 107 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 RNU6-610P-201ENST00000384264 107 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 Y_RNA.493-201ENST00000384422 102 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 SNORA66-201ENST00000384792 133 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 MIR105-1-201ENST00000385222 81 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 SNORD96B-201ENST00000386148 79 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 MT-TC-201ENST00000387405 66 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 AL133388.1-201ENST00000404509 287 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 RNA5SP146-201ENST00000410743 123 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 OR51A3P-201ENST00000413596 924 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 AC009237.10-201ENST00000414112 510 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 MTCYBP24-201ENST00000420387 1106 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 COX6CP15-201ENST00000426313 211 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 AC019185.1-201ENST00000442718 389 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 CEACAMP9-201ENST00000442990 513 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 EXTL2P1-201ENST00000446218 416 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 Z99714.1-201ENST00000450463 807 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 RPL23AP55-201ENST00000498163 452 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 LSM3P4-201ENST00000502948 309 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 AC134698.5-201ENST00000519444 336 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 IGLVIV-53-201ENST00000520107 367 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 NRBF2P4-201ENST00000520874 850 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 AC090281.1-201ENST00000523019 276 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 OR5D17P-201ENST00000531492 978 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 RFPL1S-203ENST00000539579 330 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 GSTP1P1-201ENST00000548078 319 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 CR383656.14-201ENST00000551951 406 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 AC107954.1-201ENST00000565906 727 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 RN7SL176P-201ENST00000580352 264 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 AC018754.1-201ENST00000607486 925 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 AC013468.1-201ENST00000608680 598 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 AL445528.2-201ENST00000620582 470 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 AC140113.4-201ENST00000622087 222 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 AL121594.5-201ENST00000631724 573 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 AF001550.2-201ENST00000636643 217 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 SEPT7P7-201ENST00000420492 1301 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 AC104966.1-201ENST00000467010 1464 ntBASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMGB1P1B2RPK0 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms