Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RLIMP2-201ENST00000427891 1563 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 MSL3P1-202ENST00000440028 1468 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AC096921.2-201ENST00000561507 1916 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 RNU6-451P-201ENST00000362921 107 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 Y_RNA.157-201ENST00000363638 102 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 RNU1-39P-201ENST00000383897 165 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 HMGB3P7-201ENST00000400214 611 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 RPS20P2-201ENST00000402520 389 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AC234782.4-201ENST00000417646 1048 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AL353193.1-201ENST00000421444 268 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 RIMKLBP2-201ENST00000424737 654 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 GTF2IP20-201ENST00000431663 360 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AC003989.1-201ENST00000434569 565 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 RPL37P3-201ENST00000456825 293 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 RPL7AP52-201ENST00000458096 790 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AC099340.1-201ENST00000475247 599 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AC022206.1-201ENST00000495947 347 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AC139783.2-201ENST00000504847 1145 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 MTND6P2-201ENST00000512226 524 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 IGKV1D-22-201ENST00000518953 324 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 IGHVII-49-1-201ENST00000521760 224 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AC107952.1-201ENST00000524200 376 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 NANOGNBP2-201ENST00000544753 553 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 ANP32BP1-202ENST00000568553 737 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AC015917.1-201ENST00000579654 510 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AC018638.8-201ENST00000588755 281 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 VN1R80P-201ENST00000597126 338 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AC245052.7-201ENST00000601161 359 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AC020910.2-201ENST00000603635 610 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 COX6CP16-201ENST00000603667 216 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AC011468.4-201ENST00000603942 409 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 MIR98-201ENST00000606724 119 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AC012510.1-201ENST00000607946 759 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AC093388.1-201ENST00000609166 430 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AL160413.1-201ENST00000622780 310 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 FKBP1AP4-201ENST00000631775 336 ntBASIC5.57□□□□□ -1.52
SHISA3A0PJX4 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHISA3A0PJX4 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SHISA3A0PJX4 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms