Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC6.16□□□□□ -1.42
CAPN6Q9Y6Q1 AC055764.2-201ENST00000610089 670 ntBASIC6.16□□□□□ -1.42
CAPN6Q9Y6Q1 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC6.16□□□□□ -1.42
CAPN6Q9Y6Q1 FER-210ENST00000628534 558 ntTSL 5 BASIC6.16□□□□□ -1.42
CAPN6Q9Y6Q1 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.16□□□□□ -1.42
CAPN6Q9Y6Q1 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
CAPN6Q9Y6Q1 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CAPN6Q9Y6Q1 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.16□□□□□ -1.42
CAPN6Q9Y6Q1 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.16□□□□□ -1.42
CAPN6Q9Y6Q1 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CAPN6Q9Y6Q1 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CAPN6Q9Y6Q1 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 PARP4P2-201ENST00000446672 3326 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 MIR133A2-201ENST00000347538 102 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 RNU5F-6P-201ENST00000362979 116 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 Y_RNA.535-201ENST00000384612 99 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 MIR16-1-201ENST00000385271 89 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 MT-TD-201ENST00000387419 68 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 SNORA40.3-201ENST00000390964 122 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 MIR1284-201ENST00000408337 120 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 RNU2-65P-201ENST00000410162 185 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 RNU6-248P-201ENST00000410720 107 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 AL035422.1-201ENST00000414193 397 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 AL121878.1-201ENST00000418638 859 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 USP9YP20-201ENST00000419224 558 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 RPS27AP6-201ENST00000427962 448 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 AL136231.1-201ENST00000429407 730 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 NPM1P18-201ENST00000434232 732 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 RPEP4-201ENST00000437636 602 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 AL831737.1-201ENST00000441288 271 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 AL022238.1-201ENST00000442557 355 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 HMGN1P10-201ENST00000474557 553 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 RPSAP51-201ENST00000497462 645 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 MRPL57P6-201ENST00000506570 309 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 AC138866.2-201ENST00000508650 584 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 GUSBP9-201ENST00000510138 584 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 PTGES3P3-201ENST00000511479 482 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 AC087276.1-201ENST00000529659 480 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 AP005119.2-201ENST00000579735 1105 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 FAM106CP-201ENST00000582212 507 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 AC063977.5-201ENST00000601044 974 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 AC008536.2-201ENST00000607284 349 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 MIR6133-201ENST00000617057 108 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 AL139089.1-201ENST00000620372 975 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 AP000648.2-201ENST00000624182 404 ntBASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.15□□□□□ -1.42
CAPN6Q9Y6Q1 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CAPN6Q9Y6Q1 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.15□□□□□ -1.43
CAPN6Q9Y6Q1 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CAPN6Q9Y6Q1 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CAPN6Q9Y6Q1 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CAPN6Q9Y6Q1 AL161912.4-201ENST00000623889 2468 ntBASIC6.15□□□□□ -1.43
CAPN6Q9Y6Q1 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
CAPN6Q9Y6Q1 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CAPN6Q9Y6Q1 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
CAPN6Q9Y6Q1 ZNF733P-202ENST00000444809 1573 ntBASIC6.14□□□□□ -1.43
CAPN6Q9Y6Q1 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.14□□□□□ -1.43
CAPN6Q9Y6Q1 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CAPN6Q9Y6Q1 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.14□□□□□ -1.43
CAPN6Q9Y6Q1 SELENOWP1-201ENST00000322792 252 ntBASIC6.14□□□□□ -1.43
CAPN6Q9Y6Q1 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CAPN6Q9Y6Q1 RNY4P14-201ENST00000363656 96 ntBASIC6.14□□□□□ -1.43
CAPN6Q9Y6Q1 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.14□□□□□ -1.43
CAPN6Q9Y6Q1 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.14□□□□□ -1.43
CAPN6Q9Y6Q1 USP9YP13-201ENST00000417797 480 ntBASIC6.14□□□□□ -1.43
CAPN6Q9Y6Q1 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.14□□□□□ -1.43
CAPN6Q9Y6Q1 GAPDHP49-201ENST00000421421 961 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms