Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC079880.2-201ENST00000603790 1213 ntBASIC5.04□□□□□ -1.6
SNX9Q9Y5X1 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.04□□□□□ -1.6
SNX9Q9Y5X1 AC008759.3-201ENST00000613300 508 ntBASIC5.04□□□□□ -1.6
SNX9Q9Y5X1 RN7SL722P-201ENST00000617780 284 ntBASIC5.04□□□□□ -1.6
SNX9Q9Y5X1 AC015914.2-201ENST00000618167 288 ntBASIC5.04□□□□□ -1.6
SNX9Q9Y5X1 RN7SL565P-201ENST00000618246 284 ntBASIC5.04□□□□□ -1.6
SNX9Q9Y5X1 AC109809.1-201ENST00000619665 545 ntBASIC5.04□□□□□ -1.6
SNX9Q9Y5X1 AC015804.1-201ENST00000622935 435 ntBASIC5.04□□□□□ -1.6
SNX9Q9Y5X1 AC015871.5-202ENST00000623252 701 ntBASIC5.04□□□□□ -1.6
SNX9Q9Y5X1 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SNX9Q9Y5X1 AC011815.3-201ENST00000624194 473 ntBASIC5.04□□□□□ -1.6
SNX9Q9Y5X1 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.04□□□□□ -1.6
SNX9Q9Y5X1 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.04□□□□□ -1.6
SNX9Q9Y5X1 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.04□□□□□ -1.6
SNX9Q9Y5X1 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.04□□□□□ -1.6
SNX9Q9Y5X1 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.04□□□□□ -1.6
SNX9Q9Y5X1 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNX9Q9Y5X1 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SNX9Q9Y5X1 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.04□□□□□ -1.6
SNX9Q9Y5X1 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
SNX9Q9Y5X1 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNX9Q9Y5X1 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SNX9Q9Y5X1 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNX9Q9Y5X1 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.04□□□□□ -1.6
SNX9Q9Y5X1 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SNX9Q9Y5X1 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNX9Q9Y5X1 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.04□□□□□ -1.6
SNX9Q9Y5X1 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SNX9Q9Y5X1 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.04□□□□□ -1.6
SNX9Q9Y5X1 AL445487.1-201ENST00000415694 1580 ntBASIC5.04□□□□□ -1.6
SNX9Q9Y5X1 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNX9Q9Y5X1 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 RN7SKP115-201ENST00000363177 317 ntBASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 RNA5SP505-201ENST00000364748 108 ntBASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 RNU6-398P-201ENST00000384143 109 ntBASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 RNU6-178P-201ENST00000384631 104 ntBASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 OR51B3P-201ENST00000412287 913 ntBASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 CKS1BP6-201ENST00000424932 240 ntBASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 PTP4A1P3-201ENST00000433661 420 ntBASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 AL138878.2-201ENST00000440581 1241 ntBASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 CASP3P1-201ENST00000446037 609 ntBASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 RHEBP2-201ENST00000450289 600 ntBASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 CEACAMP6-201ENST00000452007 574 ntBASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 AL591473.1-201ENST00000464297 313 ntBASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 AC104982.1-201ENST00000478775 574 ntBASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 MTND2P32-201ENST00000521584 1038 ntBASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 OR5AN2P-201ENST00000534535 896 ntBASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 CR383656.6-201ENST00000550518 394 ntBASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 MIR4330-201ENST00000579077 105 ntBASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 RN7SL690P-201ENST00000582087 240 ntBASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 AC068790.7-201ENST00000602347 528 ntBASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 AC026741.1-201ENST00000605892 482 ntBASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 AL136295.6-201ENST00000610486 658 ntBASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 uc_338.18-201ENST00000615451 175 ntBASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 OR5AC4P-202ENST00000642086 985 ntBASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 AL359715.4-201ENST00000606629 1436 ntBASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 CASC19-206ENST00000641028 1430 ntBASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 AC010329.2-201ENST00000595195 2737 ntBASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SNX9Q9Y5X1 AL592182.3-201ENST00000642132 3304 ntBASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 ZFRP1-201ENST00000457579 2970 ntBASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 RPL22P22-201ENST00000395439 379 ntBASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 AL049697.2-201ENST00000403708 294 ntBASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 NCSTNP1-201ENST00000406229 144 ntBASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 BX664727.1-201ENST00000416024 466 ntBASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 AC119751.6-201ENST00000416712 186 ntBASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 AC106883.1-201ENST00000418805 562 ntBASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 AC069213.2-201ENST00000420238 366 ntBASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 OR6K4P-201ENST00000423179 955 ntBASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 RPL7P57-201ENST00000423238 740 ntBASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 USP12PY-201ENST00000427677 1064 ntBASIC5.02□□□□□ -1.61
SNX9Q9Y5X1 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms