Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 AL096800.1-201ENST00000405326 893 ntBASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 SNORA11B-201ENST00000408175 129 ntBASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 AC108059.2-201ENST00000434626 151 ntBASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 AC093156.1-201ENST00000440382 670 ntBASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 AC073415.1-201ENST00000449240 153 ntBASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 MTND3P16-201ENST00000452205 344 ntBASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 TRBV26-201ENST00000456572 344 ntBASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 RPL23AP8-201ENST00000479812 475 ntBASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 AC091885.1-201ENST00000506658 268 ntBASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 AC008055.1-201ENST00000547032 609 ntBASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 HAUS8P1-201ENST00000549005 542 ntBASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 RN7SL230P-201ENST00000580835 303 ntBASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 AC015801.1-201ENST00000585651 153 ntBASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 AC006006.1-201ENST00000603082 144 ntBASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 XIAPP1-201ENST00000603162 600 ntBASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 RNU6-89P-201ENST00000606519 100 ntBASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 AC241377.1-201ENST00000619797 406 ntBASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 NF1P8-201ENST00000415351 1461 ntBASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 IARS-205ENST00000443024 4341 ntTSL 5 BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 AC138915.4-201ENST00000565549 4147 ntBASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 ASNSP3-201ENST00000451989 1306 ntBASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 AC018688.1-201ENST00000636528 1754 ntBASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 RNA5SP188-201ENST00000362916 129 ntBASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 RNY4P16-201ENST00000364768 94 ntBASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 AC115283.1-201ENST00000427353 400 ntBASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 AKR1D1P1-201ENST00000457236 936 ntBASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 Y_RNA.635-201ENST00000459041 101 ntBASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 TAF8-207ENST00000482432 556 ntTSL 2 BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 OR4D12P-201ENST00000509361 911 ntBASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 AC114797.1-201ENST00000514003 728 ntBASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 RNU4ATAC8P-201ENST00000516196 109 ntBASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 SCARNA24.1-201ENST00000516465 137 ntBASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 Y_RNA.718-201ENST00000517110 102 ntBASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 ST13P6-201ENST00000522430 1102 ntBASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 AP003497.1-201ENST00000528472 562 ntBASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 CYCSP28-201ENST00000534284 321 ntBASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 OR1E3-201ENST00000575608 948 ntBASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 MIR3146-201ENST00000580367 79 ntBASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC7.26□□□□□ -1.25
LIMD1Q9UGP4 AC009597.2-201ENST00000604659 592 ntBASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms