Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 RNU6-839P-201ENST00000363347 108 ntBASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 RNA5SP284-201ENST00000384547 118 ntBASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 RNA5SP91-201ENST00000390902 119 ntBASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 AL596448.1-201ENST00000415024 392 ntBASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 MTCYBP38-201ENST00000417160 1123 ntBASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 AC114814.2-201ENST00000419195 485 ntBASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 AC093155.2-201ENST00000420734 937 ntBASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 Z93242.1-201ENST00000427102 353 ntBASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 MTND6P12-201ENST00000428247 522 ntBASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 RPS29P14-201ENST00000431518 171 ntBASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 HMGB3P24-201ENST00000433260 622 ntBASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 AC241584.1-201ENST00000438469 1241 ntBASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 ST13P20-201ENST00000447996 1065 ntBASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 RPL36AP33-201ENST00000450395 310 ntBASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 RPS23P2-201ENST00000463671 415 ntBASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 UBFD1P1-201ENST00000473259 814 ntBASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 RPL7P41-201ENST00000485823 957 ntBASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 RPL32P33-201ENST00000487023 394 ntBASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 RPS27AP18-201ENST00000515536 459 ntBASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 RN7SKP31-201ENST00000516354 278 ntBASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 RNU6-405P-201ENST00000516637 110 ntBASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 AC090525.3-201ENST00000605601 189 ntBASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 AC091946.2-201ENST00000606105 291 ntBASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 AP002360.4-201ENST00000606980 481 ntBASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 AC090607.5-201ENST00000615692 224 ntBASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 AC023509.5-201ENST00000617434 807 ntBASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 AC005840.5-201ENST00000619166 599 ntBASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 AC073348.1-201ENST00000623002 331 ntBASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PPARGC1AQ9UBK2 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 DBF4P1-201ENST00000412976 1892 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 AC011447.7-201ENST00000624228 1590 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 RNA5SP394-201ENST00000364216 119 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 OR52E6-202ENST00000379946 954 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 MIR130A-201ENST00000385274 89 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 U3.23-201ENST00000391132 200 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 ATP5F1P4-201ENST00000397288 746 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 AL161909.1-201ENST00000397390 712 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 USP9YP33-201ENST00000412220 421 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 CYCSP46-201ENST00000423569 204 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 AC099670.2-201ENST00000435130 321 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 RPL12P11-201ENST00000439970 501 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 TRIM60P18-201ENST00000441518 828 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 MTND4P18-201ENST00000447010 465 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 AL592447.1-201ENST00000447592 540 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 MEMO1P4-201ENST00000453590 386 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 RNA5SP269-201ENST00000459032 137 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 RPS4XP12-201ENST00000461747 709 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 RPS23P6-201ENST00000466136 431 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 AC104763.1-201ENST00000475274 360 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 AC098799.3-201ENST00000506095 438 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms