Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.9□□□□□ -1.46
VTA1Q9NP79 OR8A2P-201ENST00000528631 952 ntBASIC5.9□□□□□ -1.46
VTA1Q9NP79 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.9□□□□□ -1.46
VTA1Q9NP79 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.9□□□□□ -1.46
VTA1Q9NP79 EDDM3DP-201ENST00000554692 434 ntBASIC5.9□□□□□ -1.46
VTA1Q9NP79 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.9□□□□□ -1.46
VTA1Q9NP79 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.9□□□□□ -1.46
VTA1Q9NP79 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VTA1Q9NP79 MIR4675-201ENST00000577898 77 ntBASIC5.9□□□□□ -1.46
VTA1Q9NP79 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.9□□□□□ -1.46
VTA1Q9NP79 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.9□□□□□ -1.46
VTA1Q9NP79 AL353778.1-201ENST00000603149 408 ntBASIC5.9□□□□□ -1.46
VTA1Q9NP79 AC011453.2-201ENST00000603737 729 ntBASIC5.9□□□□□ -1.46
VTA1Q9NP79 AC087783.2-201ENST00000605070 562 ntBASIC5.9□□□□□ -1.46
VTA1Q9NP79 uc_338.9-201ENST00000617424 182 ntBASIC5.9□□□□□ -1.46
VTA1Q9NP79 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.9□□□□□ -1.46
VTA1Q9NP79 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.9□□□□□ -1.46
VTA1Q9NP79 AC103706.2-201ENST00000638080 240 ntBASIC5.9□□□□□ -1.46
VTA1Q9NP79 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
VTA1Q9NP79 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.9□□□□□ -1.47
VTA1Q9NP79 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.9□□□□□ -1.47
VTA1Q9NP79 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
VTA1Q9NP79 AL359955.1-201ENST00000455242 3275 ntBASIC5.9□□□□□ -1.47
VTA1Q9NP79 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
VTA1Q9NP79 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
VTA1Q9NP79 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.9□□□□□ -1.47
VTA1Q9NP79 RNF6P1-201ENST00000444889 1784 ntBASIC5.9□□□□□ -1.47
VTA1Q9NP79 AL355852.1-201ENST00000454081 1771 ntBASIC5.9□□□□□ -1.47
VTA1Q9NP79 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.9□□□□□ -1.47
VTA1Q9NP79 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.9□□□□□ -1.47
VTA1Q9NP79 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.9□□□□□ -1.47
VTA1Q9NP79 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
VTA1Q9NP79 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
VTA1Q9NP79 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.9□□□□□ -1.47
VTA1Q9NP79 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
VTA1Q9NP79 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
VTA1Q9NP79 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VTA1Q9NP79 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VTA1Q9NP79 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VTA1Q9NP79 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
VTA1Q9NP79 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
VTA1Q9NP79 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
VTA1Q9NP79 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
VTA1Q9NP79 AC020633.1-201ENST00000468439 2247 ntBASIC5.89□□□□□ -1.47
VTA1Q9NP79 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
VTA1Q9NP79 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
VTA1Q9NP79 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VTA1Q9NP79 OR1L1-202ENST00000373686 1083 ntBASIC5.89□□□□□ -1.47
VTA1Q9NP79 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VTA1Q9NP79 RNU6-157P-201ENST00000383957 107 ntBASIC5.89□□□□□ -1.47
VTA1Q9NP79 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.89□□□□□ -1.47
VTA1Q9NP79 RNU4-72P-201ENST00000410754 173 ntBASIC5.89□□□□□ -1.47
VTA1Q9NP79 RNU6-575P-201ENST00000411326 105 ntBASIC5.89□□□□□ -1.47
VTA1Q9NP79 MTND4P22-201ENST00000413116 1169 ntBASIC5.89□□□□□ -1.47
VTA1Q9NP79 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.89□□□□□ -1.47
VTA1Q9NP79 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.89□□□□□ -1.47
VTA1Q9NP79 AL360081.1-201ENST00000428299 555 ntBASIC5.89□□□□□ -1.47
VTA1Q9NP79 RPL7P4-203ENST00000430239 730 ntBASIC5.89□□□□□ -1.47
VTA1Q9NP79 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.89□□□□□ -1.47
VTA1Q9NP79 HMGB1P45-201ENST00000435986 653 ntBASIC5.89□□□□□ -1.47
VTA1Q9NP79 YWHAZP7-201ENST00000436906 631 ntBASIC5.89□□□□□ -1.47
VTA1Q9NP79 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.89□□□□□ -1.47
VTA1Q9NP79 AC092473.1-201ENST00000441098 221 ntBASIC5.89□□□□□ -1.47
VTA1Q9NP79 snoU13.20-201ENST00000459180 104 ntBASIC5.89□□□□□ -1.47
VTA1Q9NP79 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.89□□□□□ -1.47
VTA1Q9NP79 RPS29P22-201ENST00000472363 168 ntBASIC5.89□□□□□ -1.47
VTA1Q9NP79 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.89□□□□□ -1.47
VTA1Q9NP79 HMGN2P25-201ENST00000486956 268 ntBASIC5.89□□□□□ -1.47
VTA1Q9NP79 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.89□□□□□ -1.47
VTA1Q9NP79 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.89□□□□□ -1.47
VTA1Q9NP79 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.89□□□□□ -1.47
VTA1Q9NP79 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.89□□□□□ -1.47
VTA1Q9NP79 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.89□□□□□ -1.47
VTA1Q9NP79 RNU6-416P-201ENST00000516265 103 ntBASIC5.89□□□□□ -1.47
VTA1Q9NP79 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.89□□□□□ -1.47
VTA1Q9NP79 COX6B1P6-201ENST00000522347 255 ntBASIC5.89□□□□□ -1.47
VTA1Q9NP79 AL356057.1-201ENST00000533798 831 ntBASIC5.89□□□□□ -1.47
VTA1Q9NP79 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VTA1Q9NP79 AC092747.2-201ENST00000545069 983 ntBASIC5.89□□□□□ -1.47
VTA1Q9NP79 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.89□□□□□ -1.47
VTA1Q9NP79 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.89□□□□□ -1.47
VTA1Q9NP79 NPM1P47-201ENST00000560843 856 ntBASIC5.89□□□□□ -1.47
VTA1Q9NP79 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VTA1Q9NP79 AC019322.1-201ENST00000571869 389 ntBASIC5.89□□□□□ -1.47
VTA1Q9NP79 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.89□□□□□ -1.47
VTA1Q9NP79 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
VTA1Q9NP79 AC008814.1-201ENST00000603797 406 ntBASIC5.89□□□□□ -1.47
VTA1Q9NP79 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.89□□□□□ -1.47
VTA1Q9NP79 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.89□□□□□ -1.47
VTA1Q9NP79 AC121247.2-201ENST00000604776 136 ntBASIC5.89□□□□□ -1.47
VTA1Q9NP79 AL451049.1-201ENST00000608672 497 ntBASIC5.89□□□□□ -1.47
VTA1Q9NP79 AC090246.1-201ENST00000616499 426 ntBASIC5.89□□□□□ -1.47
VTA1Q9NP79 AC099654.6-201ENST00000636487 512 ntBASIC5.89□□□□□ -1.47
VTA1Q9NP79 AC000095.2-202ENST00000637415 154 ntBASIC5.89□□□□□ -1.47
VTA1Q9NP79 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VTA1Q9NP79 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
VTA1Q9NP79 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VTA1Q9NP79 AC006484.1-201ENST00000435086 1884 ntBASIC5.89□□□□□ -1.47
VTA1Q9NP79 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VTA1Q9NP79 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms