Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AL034374.1-201ENST00000406329 351 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 MIR1231-201ENST00000408101 92 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 RN7SKP121-201ENST00000410842 305 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 RNU6-195P-201ENST00000411352 109 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 MYL6P5-201ENST00000412707 459 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 JKAMPP1-201ENST00000413804 919 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC6.09□□□□□ -1.43
SSU72Q9NP77 AL354751.2-201ENST00000415471 210 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 TMBIM7P-201ENST00000418074 855 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 AC092634.6-201ENST00000418558 192 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 AF228730.4-201ENST00000421457 183 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 AL354766.1-201ENST00000423396 542 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 NIPA2P1-201ENST00000426223 976 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 AC109583.1-201ENST00000432156 268 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 PPIAP10-201ENST00000438675 458 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC6.09□□□□□ -1.43
SSU72Q9NP77 TRGVB-201ENST00000453257 471 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.09□□□□□ -1.43
SSU72Q9NP77 RPS4XP17-201ENST00000479057 754 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 EIF3LP3-201ENST00000495197 822 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SSU72Q9NP77 AC010409.2-201ENST00000505780 478 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC6.09□□□□□ -1.43
SSU72Q9NP77 KHDC1P1-201ENST00000511053 508 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 AC093816.1-201ENST00000515076 913 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 SNORA48.10-201ENST00000516965 160 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC6.09□□□□□ -1.43
SSU72Q9NP77 IGKV2D-10-201ENST00000520194 281 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 OR8A2P-201ENST00000528631 952 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC6.09□□□□□ -1.43
SSU72Q9NP77 ZNF322P1-201ENST00000568013 1209 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.09□□□□□ -1.43
SSU72Q9NP77 MIR4307-201ENST00000582802 84 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 AC119403.2-201ENST00000590960 598 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC6.09□□□□□ -1.43
SSU72Q9NP77 AC020910.2-201ENST00000603635 610 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 AC018695.5-201ENST00000605872 315 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 AC141002.1-201ENST00000607025 279 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 AL591167.1-201ENST00000607321 456 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.09□□□□□ -1.43
SSU72Q9NP77 MIR6762-201ENST00000613340 86 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.09□□□□□ -1.43
SSU72Q9NP77 USP12-203ENST00000620323 349 ntTSL 3 BASIC6.09□□□□□ -1.43
SSU72Q9NP77 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.09□□□□□ -1.43
SSU72Q9NP77 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SSU72Q9NP77 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.09□□□□□ -1.43
SSU72Q9NP77 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SSU72Q9NP77 AC024651.2-201ENST00000562480 2098 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SSU72Q9NP77 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
SSU72Q9NP77 AC021242.1-201ENST00000507315 2035 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 AP000432.2-201ENST00000624164 2048 ntBASIC6.09□□□□□ -1.43
SSU72Q9NP77 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SSU72Q9NP77 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
SSU72Q9NP77 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SSU72Q9NP77 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SSU72Q9NP77 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SSU72Q9NP77 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.09□□□□□ -1.44
SSU72Q9NP77 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SSU72Q9NP77 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SSU72Q9NP77 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SSU72Q9NP77 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.08□□□□□ -1.44
SSU72Q9NP77 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.08□□□□□ -1.44
SSU72Q9NP77 FARSBP1-201ENST00000435808 1778 ntBASIC6.08□□□□□ -1.44
SSU72Q9NP77 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SSU72Q9NP77 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
SSU72Q9NP77 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.08□□□□□ -1.44
SSU72Q9NP77 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SSU72Q9NP77 Y_RNA.1-201ENST00000352915 104 ntBASIC6.08□□□□□ -1.44
SSU72Q9NP77 Y_RNA.142-201ENST00000363491 102 ntBASIC6.08□□□□□ -1.44
SSU72Q9NP77 RNU6-533P-201ENST00000384144 107 ntBASIC6.08□□□□□ -1.44
SSU72Q9NP77 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SSU72Q9NP77 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SSU72Q9NP77 AC026310.1-201ENST00000396004 378 ntBASIC6.08□□□□□ -1.44
SSU72Q9NP77 NACAP7-201ENST00000407371 609 ntBASIC6.08□□□□□ -1.44
SSU72Q9NP77 Y_RNA.608-201ENST00000410647 95 ntBASIC6.08□□□□□ -1.44
SSU72Q9NP77 RN7SKP279-201ENST00000411383 298 ntBASIC6.08□□□□□ -1.44
SSU72Q9NP77 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.08□□□□□ -1.44
SSU72Q9NP77 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.08□□□□□ -1.44
SSU72Q9NP77 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.08□□□□□ -1.44
SSU72Q9NP77 AC004690.1-201ENST00000418216 328 ntBASIC6.08□□□□□ -1.44
SSU72Q9NP77 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.08□□□□□ -1.44
SSU72Q9NP77 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC6.08□□□□□ -1.44
SSU72Q9NP77 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.08□□□□□ -1.44
SSU72Q9NP77 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC6.08□□□□□ -1.44
SSU72Q9NP77 PCNPP2-201ENST00000441651 455 ntBASIC6.08□□□□□ -1.44
SSU72Q9NP77 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.08□□□□□ -1.44
SSU72Q9NP77 BMS1P10-201ENST00000443754 1120 ntBASIC6.08□□□□□ -1.44
SSU72Q9NP77 YWHAQP9-201ENST00000445891 512 ntBASIC6.08□□□□□ -1.44
SSU72Q9NP77 REG1CP-206ENST00000447469 496 ntBASIC6.08□□□□□ -1.44
SSU72Q9NP77 MTCO3P20-201ENST00000454926 688 ntBASIC6.08□□□□□ -1.44
SSU72Q9NP77 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.08□□□□□ -1.44
SSU72Q9NP77 AC117394.1-201ENST00000477323 567 ntBASIC6.08□□□□□ -1.44
SSU72Q9NP77 RPL39P36-201ENST00000490784 156 ntBASIC6.08□□□□□ -1.44
SSU72Q9NP77 OR7E99P-201ENST00000505750 922 ntBASIC6.08□□□□□ -1.44
SSU72Q9NP77 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SSU72Q9NP77 Y_RNA.675-201ENST00000516389 149 ntBASIC6.08□□□□□ -1.44
SSU72Q9NP77 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SSU72Q9NP77 AC022832.1-201ENST00000530718 645 ntBASIC6.08□□□□□ -1.44
SSU72Q9NP77 AP003122.4-201ENST00000530980 758 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms