Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.62□□□□□ -1.67
DDX47Q9H0S4 AC009117.1-201ENST00000563948 554 ntBASIC4.62□□□□□ -1.67
DDX47Q9H0S4 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.62□□□□□ -1.67
DDX47Q9H0S4 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.62□□□□□ -1.67
DDX47Q9H0S4 MIR7155-201ENST00000615925 56 ntBASIC4.62□□□□□ -1.67
DDX47Q9H0S4 AC025016.1-201ENST00000616746 682 ntBASIC4.62□□□□□ -1.67
DDX47Q9H0S4 AP004607.9-201ENST00000618202 316 ntBASIC4.62□□□□□ -1.67
DDX47Q9H0S4 MIR6853-201ENST00000619642 74 ntBASIC4.62□□□□□ -1.67
DDX47Q9H0S4 AC087385.3-201ENST00000620477 187 ntBASIC4.62□□□□□ -1.67
DDX47Q9H0S4 AC068870.2-201ENST00000620635 389 ntBASIC4.62□□□□□ -1.67
DDX47Q9H0S4 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.62□□□□□ -1.67
DDX47Q9H0S4 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.62□□□□□ -1.67
DDX47Q9H0S4 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
DDX47Q9H0S4 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
DDX47Q9H0S4 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
DDX47Q9H0S4 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.62□□□□□ -1.67
DDX47Q9H0S4 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
DDX47Q9H0S4 PHKBP1-201ENST00000450951 1951 ntBASIC4.62□□□□□ -1.67
DDX47Q9H0S4 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
DDX47Q9H0S4 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
DDX47Q9H0S4 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
DDX47Q9H0S4 DDX18P3-201ENST00000404856 2007 ntBASIC4.62□□□□□ -1.67
DDX47Q9H0S4 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.62□□□□□ -1.67
DDX47Q9H0S4 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
DDX47Q9H0S4 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
DDX47Q9H0S4 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
DDX47Q9H0S4 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
DDX47Q9H0S4 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.61□□□□□ -1.67
DDX47Q9H0S4 AL590240.1-201ENST00000334118 313 ntBASIC4.61□□□□□ -1.67
DDX47Q9H0S4 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
DDX47Q9H0S4 SNORD51.1-201ENST00000365405 77 ntBASIC4.61□□□□□ -1.67
DDX47Q9H0S4 RHOT1P2-201ENST00000366423 333 ntBASIC4.61□□□□□ -1.67
DDX47Q9H0S4 AL645927.1-201ENST00000396783 406 ntBASIC4.61□□□□□ -1.67
DDX47Q9H0S4 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.61□□□□□ -1.67
DDX47Q9H0S4 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.61□□□□□ -1.67
DDX47Q9H0S4 MIR1911-201ENST00000410783 80 ntBASIC4.61□□□□□ -1.67
DDX47Q9H0S4 RNA5SP104-201ENST00000410989 118 ntBASIC4.61□□□□□ -1.67
DDX47Q9H0S4 RN7SKP100-201ENST00000411258 284 ntBASIC4.61□□□□□ -1.67
DDX47Q9H0S4 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.61□□□□□ -1.67
DDX47Q9H0S4 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.61□□□□□ -1.67
DDX47Q9H0S4 RPS23P10-201ENST00000416185 486 ntBASIC4.61□□□□□ -1.67
DDX47Q9H0S4 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.61□□□□□ -1.67
DDX47Q9H0S4 MTND4P24-201ENST00000424002 397 ntBASIC4.61□□□□□ -1.67
DDX47Q9H0S4 RPS12P10-201ENST00000427031 377 ntBASIC4.61□□□□□ -1.67
DDX47Q9H0S4 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.61□□□□□ -1.67
DDX47Q9H0S4 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.61□□□□□ -1.67
DDX47Q9H0S4 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.61□□□□□ -1.67
DDX47Q9H0S4 RPL23AP43-201ENST00000446445 471 ntBASIC4.61□□□□□ -1.67
DDX47Q9H0S4 EIF4A1P11-201ENST00000451239 222 ntBASIC4.61□□□□□ -1.67
DDX47Q9H0S4 VN1R32P-201ENST00000452234 905 ntBASIC4.61□□□□□ -1.67
DDX47Q9H0S4 RN7SL329P-201ENST00000467740 299 ntBASIC4.61□□□□□ -1.67
DDX47Q9H0S4 AC025459.1-201ENST00000504072 156 ntBASIC4.61□□□□□ -1.67
DDX47Q9H0S4 HMGB3P13-201ENST00000511263 607 ntBASIC4.61□□□□□ -1.67
DDX47Q9H0S4 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.61□□□□□ -1.67
DDX47Q9H0S4 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.61□□□□□ -1.67
DDX47Q9H0S4 HAUS1P3-201ENST00000523909 662 ntBASIC4.61□□□□□ -1.67
DDX47Q9H0S4 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.61□□□□□ -1.67
DDX47Q9H0S4 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.61□□□□□ -1.67
DDX47Q9H0S4 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.61□□□□□ -1.67
DDX47Q9H0S4 AC027176.2-201ENST00000559166 746 ntBASIC4.61□□□□□ -1.67
DDX47Q9H0S4 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.61□□□□□ -1.67
DDX47Q9H0S4 BGLT3-201ENST00000564523 994 ntBASIC4.61□□□□□ -1.67
DDX47Q9H0S4 AC007448.1-201ENST00000582714 234 ntBASIC4.61□□□□□ -1.67
DDX47Q9H0S4 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.61□□□□□ -1.67
DDX47Q9H0S4 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.61□□□□□ -1.67
DDX47Q9H0S4 AC005242.1-201ENST00000585658 438 ntBASIC4.61□□□□□ -1.67
DDX47Q9H0S4 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.61□□□□□ -1.67
DDX47Q9H0S4 AC008638.3-201ENST00000603341 463 ntBASIC4.61□□□□□ -1.67
DDX47Q9H0S4 AC090525.3-201ENST00000605601 189 ntBASIC4.61□□□□□ -1.67
DDX47Q9H0S4 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.61□□□□□ -1.67
DDX47Q9H0S4 AC055764.2-201ENST00000610089 670 ntBASIC4.61□□□□□ -1.67
DDX47Q9H0S4 AC006065.6-201ENST00000625201 545 ntBASIC4.61□□□□□ -1.67
DDX47Q9H0S4 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.61□□□□□ -1.67
DDX47Q9H0S4 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.61□□□□□ -1.67
DDX47Q9H0S4 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
DDX47Q9H0S4 AC011266.1-201ENST00000624119 3569 ntBASIC4.6□□□□□ -1.67
DDX47Q9H0S4 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.6□□□□□ -1.67
DDX47Q9H0S4 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
DDX47Q9H0S4 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
DDX47Q9H0S4 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.6□□□□□ -1.67
DDX47Q9H0S4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
DDX47Q9H0S4 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
DDX47Q9H0S4 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
DDX47Q9H0S4 AL589826.1-201ENST00000340697 249 ntBASIC4.6□□□□□ -1.67
DDX47Q9H0S4 SNORD115-48-201ENST00000364764 76 ntBASIC4.6□□□□□ -1.67
DDX47Q9H0S4 SNORA71.2-201ENST00000364941 134 ntBASIC4.6□□□□□ -1.67
DDX47Q9H0S4 MIR659-201ENST00000384963 97 ntBASIC4.6□□□□□ -1.67
DDX47Q9H0S4 EIF4A1P3-201ENST00000411521 244 ntBASIC4.6□□□□□ -1.67
DDX47Q9H0S4 AC010385.1-201ENST00000412374 256 ntBASIC4.6□□□□□ -1.67
DDX47Q9H0S4 RPS20P14-201ENST00000412545 360 ntBASIC4.6□□□□□ -1.67
DDX47Q9H0S4 BX510359.2-201ENST00000417920 305 ntBASIC4.6□□□□□ -1.67
DDX47Q9H0S4 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.6□□□□□ -1.67
DDX47Q9H0S4 ZNF965P-201ENST00000432501 817 ntBASIC4.6□□□□□ -1.67
DDX47Q9H0S4 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.6□□□□□ -1.67
DDX47Q9H0S4 AL049745.1-201ENST00000433953 286 ntBASIC4.6□□□□□ -1.67
DDX47Q9H0S4 LYPLA1P1-201ENST00000434514 622 ntBASIC4.6□□□□□ -1.67
DDX47Q9H0S4 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.6□□□□□ -1.67
DDX47Q9H0S4 PTMAP6-201ENST00000439110 327 ntBASIC4.6□□□□□ -1.67
DDX47Q9H0S4 UBE2V1P3-201ENST00000439651 417 ntBASIC4.6□□□□□ -1.67
DDX47Q9H0S4 SUMO2P1-206ENST00000445436 284 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms