Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.38□□□□□ -1.55
SMOQ99835 MTCO1P49-201ENST00000523429 802 ntBASIC5.38□□□□□ -1.55
SMOQ99835 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.38□□□□□ -1.55
SMOQ99835 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.38□□□□□ -1.55
SMOQ99835 AC044913.1-201ENST00000557200 430 ntBASIC5.38□□□□□ -1.55
SMOQ99835 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.38□□□□□ -1.55
SMOQ99835 MIR548Y-201ENST00000582739 110 ntBASIC5.38□□□□□ -1.55
SMOQ99835 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.38□□□□□ -1.55
SMOQ99835 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.38□□□□□ -1.55
SMOQ99835 AC105254.2-201ENST00000603636 436 ntBASIC5.38□□□□□ -1.55
SMOQ99835 BNIP3P4-201ENST00000604946 565 ntBASIC5.38□□□□□ -1.55
SMOQ99835 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMOQ99835 RNA5SP439-201ENST00000617595 124 ntBASIC5.38□□□□□ -1.55
SMOQ99835 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.38□□□□□ -1.55
SMOQ99835 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.38□□□□□ -1.55
SMOQ99835 MFSD8-245ENST00000641743 948 ntBASIC5.38□□□□□ -1.55
SMOQ99835 AP001029.2-203ENST00000589795 4910 ntBASIC5.38□□□□□ -1.55
SMOQ99835 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SMOQ99835 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMOQ99835 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMOQ99835 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SMOQ99835 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SMOQ99835 AL445523.1-201ENST00000451184 1362 ntBASIC5.38□□□□□ -1.55
SMOQ99835 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMOQ99835 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMOQ99835 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SMOQ99835 CASC19-206ENST00000641028 1430 ntBASIC5.38□□□□□ -1.55
SMOQ99835 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMOQ99835 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMOQ99835 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMOQ99835 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.38□□□□□ -1.55
SMOQ99835 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.38□□□□□ -1.55
SMOQ99835 ELL2P3-201ENST00000457883 1602 ntBASIC5.37□□□□□ -1.55
SMOQ99835 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SMOQ99835 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SMOQ99835 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.37□□□□□ -1.55
SMOQ99835 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SMOQ99835 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
SMOQ99835 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SMOQ99835 RN7SKP104-201ENST00000362605 328 ntBASIC5.37□□□□□ -1.55
SMOQ99835 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SMOQ99835 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SMOQ99835 SNORA2.3-201ENST00000383920 135 ntBASIC5.37□□□□□ -1.55
SMOQ99835 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SMOQ99835 ADAM24P-201ENST00000398655 2101 ntBASIC5.37□□□□□ -1.55
SMOQ99835 AL109941.1-201ENST00000401925 229 ntBASIC5.37□□□□□ -1.55
SMOQ99835 AL589647.1-201ENST00000402485 466 ntBASIC5.37□□□□□ -1.55
SMOQ99835 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.37□□□□□ -1.55
SMOQ99835 MTND4P20-201ENST00000424125 869 ntBASIC5.37□□□□□ -1.55
SMOQ99835 CDY14P-201ENST00000431260 1014 ntBASIC5.37□□□□□ -1.55
SMOQ99835 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.37□□□□□ -1.55
SMOQ99835 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.37□□□□□ -1.55
SMOQ99835 HMGB1P48-201ENST00000446155 598 ntBASIC5.37□□□□□ -1.55
SMOQ99835 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.37□□□□□ -1.55
SMOQ99835 CDY23P-201ENST00000451661 1014 ntBASIC5.37□□□□□ -1.55
SMOQ99835 RPS27AP8-201ENST00000452665 445 ntBASIC5.37□□□□□ -1.55
SMOQ99835 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.37□□□□□ -1.55
SMOQ99835 AC108734.3-201ENST00000481241 1165 ntBASIC5.37□□□□□ -1.55
SMOQ99835 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SMOQ99835 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.37□□□□□ -1.55
SMOQ99835 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.37□□□□□ -1.55
SMOQ99835 AC098976.1-201ENST00000513014 541 ntBASIC5.37□□□□□ -1.55
SMOQ99835 RN7SKP260-201ENST00000516907 149 ntBASIC5.37□□□□□ -1.55
SMOQ99835 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.37□□□□□ -1.55
SMOQ99835 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.37□□□□□ -1.55
SMOQ99835 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.37□□□□□ -1.55
SMOQ99835 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.37□□□□□ -1.55
SMOQ99835 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SMOQ99835 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.37□□□□□ -1.55
SMOQ99835 AC008083.2-201ENST00000546707 476 ntBASIC5.37□□□□□ -1.55
SMOQ99835 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.37□□□□□ -1.55
SMOQ99835 DUXAP1-201ENST00000556632 463 ntBASIC5.37□□□□□ -1.55
SMOQ99835 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.37□□□□□ -1.55
SMOQ99835 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.37□□□□□ -1.55
SMOQ99835 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.37□□□□□ -1.55
SMOQ99835 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SMOQ99835 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.37□□□□□ -1.55
SMOQ99835 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.37□□□□□ -1.55
SMOQ99835 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.37□□□□□ -1.55
SMOQ99835 AC068790.7-201ENST00000602347 528 ntBASIC5.37□□□□□ -1.55
SMOQ99835 OR2AS2P-201ENST00000606902 342 ntBASIC5.37□□□□□ -1.55
SMOQ99835 AL135786.2-201ENST00000608422 615 ntBASIC5.37□□□□□ -1.55
SMOQ99835 AC090425.2-201ENST00000608818 501 ntBASIC5.37□□□□□ -1.55
SMOQ99835 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC5.37□□□□□ -1.55
SMOQ99835 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SMOQ99835 CASC19-222ENST00000641321 1173 ntBASIC5.37□□□□□ -1.55
SMOQ99835 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SMOQ99835 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
SMOQ99835 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.37□□□□□ -1.55
SMOQ99835 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SMOQ99835 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SMOQ99835 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
SMOQ99835 SMG1P7-201ENST00000565246 2704 ntBASIC5.37□□□□□ -1.55
SMOQ99835 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SMOQ99835 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SMOQ99835 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
SMOQ99835 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SMOQ99835 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SMOQ99835 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.36□□□□□ -1.55
SMOQ99835 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms