Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.89□□□□□ -1.47
NUP88Q99567 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NUP88Q99567 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.89□□□□□ -1.47
NUP88Q99567 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NUP88Q99567 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.89□□□□□ -1.47
NUP88Q99567 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.89□□□□□ -1.47
NUP88Q99567 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.89□□□□□ -1.47
NUP88Q99567 MTCO1P7-201ENST00000419523 1542 ntBASIC5.89□□□□□ -1.47
NUP88Q99567 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.88□□□□□ -1.47
NUP88Q99567 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NUP88Q99567 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NUP88Q99567 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NUP88Q99567 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
NUP88Q99567 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.88□□□□□ -1.47
NUP88Q99567 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
NUP88Q99567 RN7SKP149-201ENST00000363008 344 ntBASIC5.88□□□□□ -1.47
NUP88Q99567 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NUP88Q99567 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
NUP88Q99567 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
NUP88Q99567 RPL21P67-201ENST00000402896 478 ntBASIC5.88□□□□□ -1.47
NUP88Q99567 SNORA11C-201ENST00000408532 129 ntBASIC5.88□□□□□ -1.47
NUP88Q99567 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NUP88Q99567 RPL26P29-201ENST00000415623 438 ntBASIC5.88□□□□□ -1.47
NUP88Q99567 AC114814.2-201ENST00000419195 485 ntBASIC5.88□□□□□ -1.47
NUP88Q99567 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.88□□□□□ -1.47
NUP88Q99567 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.88□□□□□ -1.47
NUP88Q99567 RPS24P8-201ENST00000431490 402 ntBASIC5.88□□□□□ -1.47
NUP88Q99567 RPL7P11-201ENST00000437586 658 ntBASIC5.88□□□□□ -1.47
NUP88Q99567 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC5.88□□□□□ -1.47
NUP88Q99567 CBX1P4-201ENST00000439415 457 ntBASIC5.88□□□□□ -1.47
NUP88Q99567 AC112492.1-201ENST00000449607 712 ntBASIC5.88□□□□□ -1.47
NUP88Q99567 AC007686.1-201ENST00000488511 463 ntBASIC5.88□□□□□ -1.47
NUP88Q99567 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NUP88Q99567 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NUP88Q99567 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NUP88Q99567 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.88□□□□□ -1.47
NUP88Q99567 AC010306.1-201ENST00000523223 1117 ntBASIC5.88□□□□□ -1.47
NUP88Q99567 AC027369.5-201ENST00000533838 755 ntBASIC5.88□□□□□ -1.47
NUP88Q99567 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.88□□□□□ -1.47
NUP88Q99567 PCNPP1-201ENST00000552501 511 ntBASIC5.88□□□□□ -1.47
NUP88Q99567 OR4U1P-201ENST00000554958 912 ntBASIC5.88□□□□□ -1.47
NUP88Q99567 AC023813.2-201ENST00000564321 469 ntBASIC5.88□□□□□ -1.47
NUP88Q99567 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.88□□□□□ -1.47
NUP88Q99567 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NUP88Q99567 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.88□□□□□ -1.47
NUP88Q99567 AL035411.2-201ENST00000604022 421 ntBASIC5.88□□□□□ -1.47
NUP88Q99567 AC087283.1-201ENST00000604029 1074 ntBASIC5.88□□□□□ -1.47
NUP88Q99567 Z99289.3-201ENST00000605586 594 ntBASIC5.88□□□□□ -1.47
NUP88Q99567 AL353726.1-201ENST00000614041 1000 ntBASIC5.88□□□□□ -1.47
NUP88Q99567 AC021755.4-201ENST00000616620 456 ntBASIC5.88□□□□□ -1.47
NUP88Q99567 AP002782.1-201ENST00000623107 614 ntBASIC5.88□□□□□ -1.47
NUP88Q99567 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.88□□□□□ -1.47
NUP88Q99567 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.88□□□□□ -1.47
NUP88Q99567 TRIM51GP-201ENST00000534741 1350 ntBASIC5.88□□□□□ -1.47
NUP88Q99567 AC005261.4-201ENST00000600047 1385 ntBASIC5.88□□□□□ -1.47
NUP88Q99567 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
NUP88Q99567 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
NUP88Q99567 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.88□□□□□ -1.47
NUP88Q99567 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NUP88Q99567 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NUP88Q99567 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
NUP88Q99567 AC104623.2-202ENST00000623477 4002 ntBASIC5.87□□□□□ -1.47
NUP88Q99567 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NUP88Q99567 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NUP88Q99567 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
NUP88Q99567 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.87□□□□□ -1.47
NUP88Q99567 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
NUP88Q99567 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.87□□□□□ -1.47
NUP88Q99567 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.87□□□□□ -1.47
NUP88Q99567 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.87□□□□□ -1.47
NUP88Q99567 RNA5SP191-201ENST00000362585 102 ntBASIC5.87□□□□□ -1.47
NUP88Q99567 SNORA2.3-201ENST00000383920 135 ntBASIC5.87□□□□□ -1.47
NUP88Q99567 RNU6-1242P-201ENST00000391052 103 ntBASIC5.87□□□□□ -1.47
NUP88Q99567 SNORA77-201ENST00000408716 125 ntBASIC5.87□□□□□ -1.47
NUP88Q99567 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.87□□□□□ -1.47
NUP88Q99567 COX5BP7-201ENST00000414780 274 ntBASIC5.87□□□□□ -1.47
NUP88Q99567 RPL22P18-201ENST00000417197 377 ntBASIC5.87□□□□□ -1.47
NUP88Q99567 AC010099.3-201ENST00000423896 409 ntBASIC5.87□□□□□ -1.47
NUP88Q99567 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.87□□□□□ -1.47
NUP88Q99567 TCEA1P3-201ENST00000443005 880 ntBASIC5.87□□□□□ -1.47
NUP88Q99567 PTENP1-201ENST00000447117 1215 ntBASIC5.87□□□□□ -1.47
NUP88Q99567 RHEBP2-201ENST00000450289 600 ntBASIC5.87□□□□□ -1.47
NUP88Q99567 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.87□□□□□ -1.47
NUP88Q99567 AL935212.3-201ENST00000450729 284 ntBASIC5.87□□□□□ -1.47
NUP88Q99567 AC245028.2-201ENST00000458673 253 ntBASIC5.87□□□□□ -1.47
NUP88Q99567 AC063943.1-201ENST00000465434 453 ntBASIC5.87□□□□□ -1.47
NUP88Q99567 RN7SL319P-201ENST00000480656 221 ntBASIC5.87□□□□□ -1.47
NUP88Q99567 AC073522.1-201ENST00000483312 377 ntBASIC5.87□□□□□ -1.47
NUP88Q99567 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.87□□□□□ -1.47
NUP88Q99567 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.87□□□□□ -1.47
NUP88Q99567 DUXAP5-201ENST00000529668 529 ntBASIC5.87□□□□□ -1.47
NUP88Q99567 AC023538.1-201ENST00000534576 736 ntBASIC5.87□□□□□ -1.47
NUP88Q99567 AC139103.1-201ENST00000534696 1030 ntBASIC5.87□□□□□ -1.47
NUP88Q99567 NMNAT1P1-201ENST00000554095 876 ntBASIC5.87□□□□□ -1.47
NUP88Q99567 AC009097.3-201ENST00000563557 1018 ntBASIC5.87□□□□□ -1.47
NUP88Q99567 MIR5708-201ENST00000579723 85 ntBASIC5.87□□□□□ -1.47
NUP88Q99567 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.87□□□□□ -1.47
NUP88Q99567 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.87□□□□□ -1.47
NUP88Q99567 AL020997.3-201ENST00000602843 359 ntBASIC5.87□□□□□ -1.47
NUP88Q99567 AC021749.1-201ENST00000604322 607 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms