Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RPRD1AQ96P16 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.58□□□□□ -1.68
RPRD1AQ96P16 AC009313.2-201ENST00000417893 1941 ntBASIC4.58□□□□□ -1.68
RPRD1AQ96P16 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RPRD1AQ96P16 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
RPRD1AQ96P16 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RPRD1AQ96P16 AC018529.3-201ENST00000624212 2254 ntBASIC4.57□□□□□ -1.68
RPRD1AQ96P16 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
RPRD1AQ96P16 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RPRD1AQ96P16 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RPRD1AQ96P16 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RPRD1AQ96P16 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RPRD1AQ96P16 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RPRD1AQ96P16 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
RPRD1AQ96P16 RNA5SP151-201ENST00000365632 117 ntBASIC4.57□□□□□ -1.68
RPRD1AQ96P16 SNORD65-201ENST00000391079 73 ntBASIC4.57□□□□□ -1.68
RPRD1AQ96P16 RNA5SP146-201ENST00000410743 123 ntBASIC4.57□□□□□ -1.68
RPRD1AQ96P16 AL160275.2-201ENST00000412010 394 ntBASIC4.57□□□□□ -1.68
RPRD1AQ96P16 RPL6P29-201ENST00000414863 865 ntBASIC4.57□□□□□ -1.68
RPRD1AQ96P16 AC062016.2-201ENST00000420950 676 ntBASIC4.57□□□□□ -1.68
RPRD1AQ96P16 OR2X1P-201ENST00000421144 687 ntBASIC4.57□□□□□ -1.68
RPRD1AQ96P16 AJ239321.1-201ENST00000424255 564 ntBASIC4.57□□□□□ -1.68
RPRD1AQ96P16 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.57□□□□□ -1.68
RPRD1AQ96P16 AC016712.1-201ENST00000431088 378 ntBASIC4.57□□□□□ -1.68
RPRD1AQ96P16 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.57□□□□□ -1.68
RPRD1AQ96P16 PPIAP13-201ENST00000434706 478 ntBASIC4.57□□□□□ -1.68
RPRD1AQ96P16 PHBP16-201ENST00000446318 950 ntBASIC4.57□□□□□ -1.68
RPRD1AQ96P16 BUD31P2-201ENST00000449374 300 ntBASIC4.57□□□□□ -1.68
RPRD1AQ96P16 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RPRD1AQ96P16 VN1R32P-201ENST00000452234 905 ntBASIC4.57□□□□□ -1.68
RPRD1AQ96P16 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RPRD1AQ96P16 DHFRP3-201ENST00000455595 559 ntBASIC4.57□□□□□ -1.68
RPRD1AQ96P16 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.57□□□□□ -1.68
RPRD1AQ96P16 NDUFA5P9-201ENST00000472609 340 ntBASIC4.57□□□□□ -1.68
RPRD1AQ96P16 RN7SL810P-201ENST00000493031 276 ntBASIC4.57□□□□□ -1.68
RPRD1AQ96P16 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.57□□□□□ -1.68
RPRD1AQ96P16 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.57□□□□□ -1.68
RPRD1AQ96P16 NPM1P35-201ENST00000533043 868 ntBASIC4.57□□□□□ -1.68
RPRD1AQ96P16 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.57□□□□□ -1.68
RPRD1AQ96P16 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.57□□□□□ -1.68
RPRD1AQ96P16 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.57□□□□□ -1.68
RPRD1AQ96P16 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RPRD1AQ96P16 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.57□□□□□ -1.68
RPRD1AQ96P16 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RPRD1AQ96P16 AL592437.2-201ENST00000421655 2434 ntBASIC4.56□□□□□ -1.68
RPRD1AQ96P16 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.56□□□□□ -1.68
RPRD1AQ96P16 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.56□□□□□ -1.68
RPRD1AQ96P16 AC007342.7-201ENST00000624610 2337 ntBASIC4.56□□□□□ -1.68
RPRD1AQ96P16 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RPRD1AQ96P16 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
RPRD1AQ96P16 Z73965.1-201ENST00000623412 2297 ntBASIC4.56□□□□□ -1.68
RPRD1AQ96P16 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.56□□□□□ -1.68
RPRD1AQ96P16 AC008033.1-201ENST00000216407 1162 ntBASIC4.56□□□□□ -1.68
RPRD1AQ96P16 OR5P1P-201ENST00000299512 925 ntBASIC4.56□□□□□ -1.68
RPRD1AQ96P16 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RPRD1AQ96P16 AL607077.1-201ENST00000401718 499 ntBASIC4.56□□□□□ -1.68
RPRD1AQ96P16 RPL23AP48-201ENST00000406913 488 ntBASIC4.56□□□□□ -1.68
RPRD1AQ96P16 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.56□□□□□ -1.68
RPRD1AQ96P16 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.56□□□□□ -1.68
RPRD1AQ96P16 AL590806.1-201ENST00000415818 853 ntBASIC4.56□□□□□ -1.68
RPRD1AQ96P16 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.56□□□□□ -1.68
RPRD1AQ96P16 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.56□□□□□ -1.68
RPRD1AQ96P16 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.56□□□□□ -1.68
RPRD1AQ96P16 UBE2V1P3-201ENST00000439651 417 ntBASIC4.56□□□□□ -1.68
RPRD1AQ96P16 EIF2S2P2-201ENST00000447161 982 ntBASIC4.56□□□□□ -1.68
RPRD1AQ96P16 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.56□□□□□ -1.68
RPRD1AQ96P16 DDX39BP2-208ENST00000453923 258 ntBASIC4.56□□□□□ -1.68
RPRD1AQ96P16 RPL7P32-201ENST00000457119 744 ntBASIC4.56□□□□□ -1.68
RPRD1AQ96P16 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.56□□□□□ -1.68
RPRD1AQ96P16 AC011276.1-201ENST00000469688 323 ntBASIC4.56□□□□□ -1.68
RPRD1AQ96P16 AC108022.1-201ENST00000493466 478 ntBASIC4.56□□□□□ -1.68
RPRD1AQ96P16 CEACAMP10-202ENST00000495431 496 ntBASIC4.56□□□□□ -1.68
RPRD1AQ96P16 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.56□□□□□ -1.68
RPRD1AQ96P16 ATG10-AS1-201ENST00000504846 648 ntBASIC4.56□□□□□ -1.68
RPRD1AQ96P16 OR51K1P-201ENST00000510214 950 ntBASIC4.56□□□□□ -1.68
RPRD1AQ96P16 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.56□□□□□ -1.68
RPRD1AQ96P16 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.56□□□□□ -1.68
RPRD1AQ96P16 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.56□□□□□ -1.68
RPRD1AQ96P16 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.56□□□□□ -1.68
RPRD1AQ96P16 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.56□□□□□ -1.68
RPRD1AQ96P16 BMS1P7-201ENST00000602440 1052 ntBASIC4.56□□□□□ -1.68
RPRD1AQ96P16 AC091979.2-201ENST00000607514 214 ntBASIC4.56□□□□□ -1.68
RPRD1AQ96P16 AP002360.3-201ENST00000607673 710 ntBASIC4.56□□□□□ -1.68
RPRD1AQ96P16 MIR6891-201ENST00000618788 93 ntBASIC4.56□□□□□ -1.68
RPRD1AQ96P16 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.56□□□□□ -1.68
RPRD1AQ96P16 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.56□□□□□ -1.68
RPRD1AQ96P16 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RPRD1AQ96P16 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RPRD1AQ96P16 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
RPRD1AQ96P16 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.56□□□□□ -1.68
RPRD1AQ96P16 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.56□□□□□ -1.68
RPRD1AQ96P16 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RPRD1AQ96P16 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RPRD1AQ96P16 AP001002.1-201ENST00000625148 1513 ntBASIC4.56□□□□□ -1.68
RPRD1AQ96P16 AC092435.4-201ENST00000623012 4159 ntBASIC4.56□□□□□ -1.68
RPRD1AQ96P16 AL133243.3-201ENST00000617415 3004 ntBASIC4.56□□□□□ -1.68
RPRD1AQ96P16 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RPRD1AQ96P16 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.55□□□□□ -1.68
RPRD1AQ96P16 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RPRD1AQ96P16 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms