Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 MIR4286-201ENST00000580651 93 ntBASIC5.86□□□□□ -1.47
CCDC7Q96M83 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC7Q96M83 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC7Q96M83 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC7Q96M83 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC7Q96M83 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.86□□□□□ -1.47
CCDC7Q96M83 AL596275.2-204ENST00000641628 552 ntBASIC5.86□□□□□ -1.47
CCDC7Q96M83 AL596275.2-206ENST00000641957 626 ntBASIC5.86□□□□□ -1.47
CCDC7Q96M83 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC7Q96M83 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
CCDC7Q96M83 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC7Q96M83 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC7Q96M83 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC7Q96M83 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC7Q96M83 AC139426.3-201ENST00000605648 2059 ntBASIC5.86□□□□□ -1.47
CCDC7Q96M83 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC7Q96M83 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
CCDC7Q96M83 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC7Q96M83 MT-RNR1-201ENST00000389680 954 ntBASIC5.85□□□□□ -1.47
CCDC7Q96M83 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC7Q96M83 ATP5F1P3-201ENST00000397213 657 ntBASIC5.85□□□□□ -1.47
CCDC7Q96M83 RN7SKP33-201ENST00000410942 340 ntBASIC5.85□□□□□ -1.47
CCDC7Q96M83 RPL6P29-201ENST00000414863 865 ntBASIC5.85□□□□□ -1.47
CCDC7Q96M83 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC7Q96M83 AC006946.1-201ENST00000429106 328 ntBASIC5.85□□□□□ -1.47
CCDC7Q96M83 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC7Q96M83 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC7Q96M83 RNA5SP246-201ENST00000458909 119 ntBASIC5.85□□□□□ -1.47
CCDC7Q96M83 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC7Q96M83 AC006499.6-201ENST00000511169 607 ntBASIC5.85□□□□□ -1.47
CCDC7Q96M83 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC7Q96M83 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC7Q96M83 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC7Q96M83 AC007599.1-201ENST00000568688 1174 ntBASIC5.85□□□□□ -1.47
CCDC7Q96M83 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC7Q96M83 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC7Q96M83 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC7Q96M83 AL356863.1-201ENST00000623378 1080 ntBASIC5.85□□□□□ -1.47
CCDC7Q96M83 AC112484.5-201ENST00000624189 228 ntBASIC5.85□□□□□ -1.47
CCDC7Q96M83 AC112200.1-201ENST00000625015 234 ntBASIC5.85□□□□□ -1.47
CCDC7Q96M83 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC7Q96M83 AC139713.2-215ENST00000641428 5037 ntBASIC5.85□□□□□ -1.47
CCDC7Q96M83 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC7Q96M83 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC7Q96M83 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC7Q96M83 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
CCDC7Q96M83 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC7Q96M83 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC7Q96M83 CYCSP19-201ENST00000411715 316 ntBASIC5.84□□□□□ -1.47
CCDC7Q96M83 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC7Q96M83 CYP4F29P-201ENST00000420685 446 ntBASIC5.84□□□□□ -1.47
CCDC7Q96M83 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC7Q96M83 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC7Q96M83 RPL5P32-201ENST00000454085 879 ntBASIC5.84□□□□□ -1.47
CCDC7Q96M83 RN7SL132P-201ENST00000478131 296 ntBASIC5.84□□□□□ -1.47
CCDC7Q96M83 RPS29P19-201ENST00000479709 171 ntBASIC5.84□□□□□ -1.47
CCDC7Q96M83 TPT1P3-201ENST00000492841 512 ntBASIC5.84□□□□□ -1.47
CCDC7Q96M83 RNA5SP143-201ENST00000516936 115 ntBASIC5.84□□□□□ -1.47
CCDC7Q96M83 AC023632.4-201ENST00000517783 191 ntBASIC5.84□□□□□ -1.47
CCDC7Q96M83 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC7Q96M83 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC7Q96M83 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC7Q96M83 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.84□□□□□ -1.47
CCDC7Q96M83 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC7Q96M83 CDRT1-208ENST00000630868 794 ntBASIC5.84□□□□□ -1.47
CCDC7Q96M83 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
CCDC7Q96M83 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC7Q96M83 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC7Q96M83 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC7Q96M83 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC7Q96M83 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CCDC7Q96M83 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CCDC7Q96M83 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CCDC7Q96M83 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
CCDC7Q96M83 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CCDC7Q96M83 RAD23BP3-201ENST00000454157 1152 ntBASIC5.83□□□□□ -1.48
CCDC7Q96M83 RNU1-45P-201ENST00000517191 141 ntBASIC5.83□□□□□ -1.48
CCDC7Q96M83 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC7Q96M83 RN7SL703P-201ENST00000578485 302 ntBASIC5.83□□□□□ -1.48
CCDC7Q96M83 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC7Q96M83 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC7Q96M83 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC7Q96M83 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
CCDC7Q96M83 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC7Q96M83 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC7Q96M83 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CCDC7Q96M83 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC7Q96M83 AL161912.2-201ENST00000565707 3007 ntBASIC5.83□□□□□ -1.48
CCDC7Q96M83 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC7Q96M83 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
CCDC7Q96M83 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC7Q96M83 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC7Q96M83 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC7Q96M83 RNA5SP513-201ENST00000364648 118 ntBASIC5.82□□□□□ -1.48
CCDC7Q96M83 AP000357.1-201ENST00000409926 1165 ntBASIC5.82□□□□□ -1.48
CCDC7Q96M83 SETP15-201ENST00000412724 337 ntBASIC5.82□□□□□ -1.48
CCDC7Q96M83 MRPL50P1-201ENST00000431951 384 ntBASIC5.82□□□□□ -1.48
CCDC7Q96M83 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC7Q96M83 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC7Q96M83 AC006517.1-201ENST00000480485 328 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms