Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 RPL21P134-201ENST00000453468 483 ntBASIC6.08□□□□□ -1.44
DDX1Q92499 HMGB1P4-201ENST00000455362 567 ntBASIC6.08□□□□□ -1.44
DDX1Q92499 AL109741.2-201ENST00000455561 343 ntBASIC6.08□□□□□ -1.44
DDX1Q92499 RPL7AP52-201ENST00000458096 790 ntBASIC6.08□□□□□ -1.44
DDX1Q92499 RPL23AP71-201ENST00000470966 469 ntBASIC6.08□□□□□ -1.44
DDX1Q92499 AC104763.1-201ENST00000475274 360 ntBASIC6.08□□□□□ -1.44
DDX1Q92499 OR2AO1P-201ENST00000476497 403 ntBASIC6.08□□□□□ -1.44
DDX1Q92499 RPL9P33-201ENST00000484311 566 ntBASIC6.08□□□□□ -1.44
DDX1Q92499 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.08□□□□□ -1.44
DDX1Q92499 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC6.08□□□□□ -1.44
DDX1Q92499 IGKV2-36-201ENST00000519999 223 ntBASIC6.08□□□□□ -1.44
DDX1Q92499 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
DDX1Q92499 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.08□□□□□ -1.44
DDX1Q92499 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.08□□□□□ -1.44
DDX1Q92499 SLC25A36P1-201ENST00000590111 465 ntBASIC6.08□□□□□ -1.44
DDX1Q92499 AC063977.5-201ENST00000601044 974 ntBASIC6.08□□□□□ -1.44
DDX1Q92499 AC079089.3-201ENST00000603094 673 ntBASIC6.08□□□□□ -1.44
DDX1Q92499 AC104785.1-201ENST00000603220 588 ntBASIC6.08□□□□□ -1.44
DDX1Q92499 MTCYBP22-201ENST00000603788 447 ntBASIC6.08□□□□□ -1.44
DDX1Q92499 AC025449.1-201ENST00000603896 529 ntBASIC6.08□□□□□ -1.44
DDX1Q92499 AL451074.6-201ENST00000608512 729 ntBASIC6.08□□□□□ -1.44
DDX1Q92499 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.08□□□□□ -1.44
DDX1Q92499 AC009878.1-201ENST00000621819 340 ntBASIC6.08□□□□□ -1.44
DDX1Q92499 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
DDX1Q92499 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
DDX1Q92499 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
DDX1Q92499 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
DDX1Q92499 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
DDX1Q92499 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
DDX1Q92499 AC005539.1-201ENST00000443768 1479 ntBASIC6.08□□□□□ -1.44
DDX1Q92499 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.08□□□□□ -1.44
DDX1Q92499 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
DDX1Q92499 AC025470.1-201ENST00000510053 2032 ntBASIC6.08□□□□□ -1.44
DDX1Q92499 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.08□□□□□ -1.44
DDX1Q92499 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.08□□□□□ -1.44
DDX1Q92499 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.07□□□□□ -1.44
DDX1Q92499 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
DDX1Q92499 AC068870.3-201ENST00000625077 2536 ntBASIC6.07□□□□□ -1.44
DDX1Q92499 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
DDX1Q92499 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
DDX1Q92499 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.07□□□□□ -1.44
DDX1Q92499 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
DDX1Q92499 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
DDX1Q92499 MRE11P1-201ENST00000464884 2127 ntBASIC6.07□□□□□ -1.44
DDX1Q92499 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
DDX1Q92499 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
DDX1Q92499 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
DDX1Q92499 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
DDX1Q92499 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
DDX1Q92499 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.07□□□□□ -1.44
DDX1Q92499 RNA5SP326-201ENST00000363209 110 ntBASIC6.07□□□□□ -1.44
DDX1Q92499 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC6.07□□□□□ -1.44
DDX1Q92499 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
DDX1Q92499 AC096921.1-201ENST00000411661 375 ntBASIC6.07□□□□□ -1.44
DDX1Q92499 USP9YP33-201ENST00000412220 421 ntBASIC6.07□□□□□ -1.44
DDX1Q92499 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.07□□□□□ -1.44
DDX1Q92499 OR51A3P-201ENST00000413596 924 ntBASIC6.07□□□□□ -1.44
DDX1Q92499 CDK8P2-201ENST00000415020 547 ntBASIC6.07□□□□□ -1.44
DDX1Q92499 AC048351.1-201ENST00000420064 602 ntBASIC6.07□□□□□ -1.44
DDX1Q92499 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC6.07□□□□□ -1.44
DDX1Q92499 AC073069.1-201ENST00000428657 441 ntBASIC6.07□□□□□ -1.44
DDX1Q92499 SEPT7P5-201ENST00000434048 306 ntBASIC6.07□□□□□ -1.44
DDX1Q92499 PPIAP17-201ENST00000438507 471 ntBASIC6.07□□□□□ -1.44
DDX1Q92499 AC098614.3-201ENST00000438957 440 ntBASIC6.07□□□□□ -1.44
DDX1Q92499 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.07□□□□□ -1.44
DDX1Q92499 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
DDX1Q92499 AL592447.1-201ENST00000447592 540 ntBASIC6.07□□□□□ -1.44
DDX1Q92499 AC083899.1-201ENST00000454465 3819 ntBASIC6.07□□□□□ -1.44
DDX1Q92499 PNPLA4P1-201ENST00000458328 305 ntBASIC6.07□□□□□ -1.44
DDX1Q92499 RN7SL826P-201ENST00000479724 288 ntBASIC6.07□□□□□ -1.44
DDX1Q92499 OR7E157P-201ENST00000494376 911 ntBASIC6.07□□□□□ -1.44
DDX1Q92499 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC6.07□□□□□ -1.44
DDX1Q92499 RPS17P5-201ENST00000498293 408 ntBASIC6.07□□□□□ -1.44
DDX1Q92499 WBP1LP4-201ENST00000505043 344 ntBASIC6.07□□□□□ -1.44
DDX1Q92499 AC073358.1-201ENST00000505671 684 ntBASIC6.07□□□□□ -1.44
DDX1Q92499 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.07□□□□□ -1.44
DDX1Q92499 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.07□□□□□ -1.44
DDX1Q92499 SCARNA6.1-201ENST00000516989 238 ntBASIC6.07□□□□□ -1.44
DDX1Q92499 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.07□□□□□ -1.44
DDX1Q92499 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
DDX1Q92499 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.07□□□□□ -1.44
DDX1Q92499 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC6.07□□□□□ -1.44
DDX1Q92499 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.07□□□□□ -1.44
DDX1Q92499 MIR1269B-201ENST00000580405 75 ntBASIC6.07□□□□□ -1.44
DDX1Q92499 MIR4505-201ENST00000582238 73 ntBASIC6.07□□□□□ -1.44
DDX1Q92499 MIR4260-201ENST00000583107 67 ntBASIC6.07□□□□□ -1.44
DDX1Q92499 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC6.07□□□□□ -1.44
DDX1Q92499 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
DDX1Q92499 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
DDX1Q92499 VN1R82P-201ENST00000601481 356 ntBASIC6.07□□□□□ -1.44
DDX1Q92499 AL583832.1-201ENST00000603227 784 ntBASIC6.07□□□□□ -1.44
DDX1Q92499 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC6.07□□□□□ -1.44
DDX1Q92499 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.07□□□□□ -1.44
DDX1Q92499 AC018926.3-201ENST00000618841 406 ntBASIC6.07□□□□□ -1.44
DDX1Q92499 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.07□□□□□ -1.44
DDX1Q92499 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.07□□□□□ -1.44
DDX1Q92499 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.07□□□□□ -1.44
DDX1Q92499 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
DDX1Q92499 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
DDX1Q92499 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms