Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 AL049697.2-201ENST00000403708 294 ntBASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 MIR1911-201ENST00000410783 80 ntBASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 AC009965.2-201ENST00000425328 970 ntBASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 AL360081.1-201ENST00000428299 555 ntBASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 SKP1P3-201ENST00000429280 487 ntBASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 VN1R54P-201ENST00000435210 1049 ntBASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 VN1R32P-201ENST00000452234 905 ntBASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 PSMC1P13-201ENST00000458195 985 ntBASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 AC006967.1-201ENST00000467608 589 ntBASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 AC092324.1-201ENST00000468671 324 ntBASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 AC105233.1-201ENST00000498840 781 ntBASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 AC021483.2-201ENST00000567415 758 ntBASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 AL121834.1-201ENST00000572284 509 ntBASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 ABI1P1-201ENST00000603375 1120 ntBASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 AC005034.4-201ENST00000603612 899 ntBASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 AC015813.4-201ENST00000610469 179 ntBASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 AC091953.3-201ENST00000623220 236 ntBASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 Z98755.1-201ENST00000407015 1384 ntBASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CLHC1Q8NHS4 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.21□□□□□ -1.73
CLHC1Q8NHS4 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 AC006971.1-201ENST00000407916 4486 ntBASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 AC103591.2-201ENST00000265259 766 ntBASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 RNU1-15P-201ENST00000353977 144 ntBASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 RNU1-108P-201ENST00000362556 161 ntBASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 SNORA11B-201ENST00000408175 129 ntBASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 RN7SKP216-201ENST00000411050 312 ntBASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 EIF2S2P4-201ENST00000461070 984 ntBASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 AC079804.1-201ENST00000461922 436 ntBASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 RNU6-319P-201ENST00000516025 108 ntBASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 IGHV3-32-201ENST00000519182 355 ntBASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 MTND6P33-201ENST00000571794 183 ntBASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 AC083899.3-201ENST00000603413 594 ntBASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 AL133243.1-201ENST00000614487 366 ntBASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 MIR7154-201ENST00000620673 73 ntBASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 AL118496.1-201ENST00000440201 1812 ntBASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 AC053481.2-202ENST00000582394 1500 ntBASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CLHC1Q8NHS4 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 MTCO1P14-201ENST00000441695 1559 ntBASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 XIAPP3-201ENST00000312918 795 ntBASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 RNA5SP397-201ENST00000391323 118 ntBASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 SNORA74C-2-201ENST00000411179 201 ntBASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 RPL7AP25-201ENST00000423357 805 ntBASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 NPM1P24-201ENST00000428039 894 ntBASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 AC073648.4-201ENST00000442655 781 ntBASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms