Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 ZNF876P-202ENST00000398732 1485 ntBASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 SNORA17.1-201ENST00000362945 126 ntBASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 RNU6-224P-201ENST00000384055 107 ntBASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 RNU6-729P-201ENST00000384399 107 ntBASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 Y_RNA.578-201ENST00000390903 88 ntBASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 AL136310.1-201ENST00000404926 654 ntBASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 QRSL1P2-201ENST00000418582 964 ntBASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 HSFY3P-201ENST00000444242 1191 ntBASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 AC010350.1-201ENST00000504908 231 ntBASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 RPL23AP53-201ENST00000521854 457 ntBASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 AC125611.1-201ENST00000549563 229 ntBASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 AC011445.2-201ENST00000599274 173 ntBASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 AC069304.3-201ENST00000603938 1084 ntBASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 AL512329.2-201ENST00000607350 548 ntBASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 AC010975.3-201ENST00000618727 978 ntBASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 AC099494.2-201ENST00000623371 978 ntBASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 AC017037.3-201ENST00000625016 472 ntBASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 AL121594.5-201ENST00000631724 573 ntBASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 AL672167.1-203ENST00000641299 2975 ntBASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.63□□□□□ -1.67
CLIP4Q8N3C7 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 Y_RNA.472-201ENST00000384322 102 ntBASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 SNORA70.10-201ENST00000384515 134 ntBASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 MIR142-201ENST00000384835 87 ntBASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 RPS29P9-201ENST00000440360 171 ntBASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 OR51B8P-201ENST00000449892 769 ntBASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 AC005410.1-202ENST00000460347 485 ntBASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 RPS17P2-201ENST00000461663 408 ntBASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 AC107015.1-201ENST00000466902 747 ntBASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 AC037198.2-201ENST00000478845 733 ntBASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 AC108120.2-201ENST00000512973 294 ntBASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 ATP5LP3-201ENST00000514223 304 ntBASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 RNA5SP249-201ENST00000516127 99 ntBASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 MTCO2P15-201ENST00000532655 656 ntBASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 AC005868.1-201ENST00000536421 331 ntBASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 AC023050.2-201ENST00000544968 387 ntBASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 AL049870.4-201ENST00000555741 486 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms