Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC012339.2-201ENST00000523996 453 ntBASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 AP000676.2-201ENST00000529711 301 ntBASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 AC051619.2-201ENST00000559063 397 ntBASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 AL392112.1-201ENST00000605115 829 ntBASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 AC144521.1-201ENST00000607148 956 ntBASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 RMST_10.1-201ENST00000616309 154 ntBASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 MAPK10-320ENST00000641462 6696 ntBASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 MFSD8-220ENST00000641243 1422 ntBASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 DHX9P1-201ENST00000436565 3076 ntBASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 EIF2AP4-201ENST00000424793 1781 ntBASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 AC138393.1-206ENST00000540997 1886 ntBASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 RNU6-98P-201ENST00000384173 107 ntBASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 RNU6-481P-201ENST00000384194 107 ntBASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 SNORA70.10-201ENST00000384515 134 ntBASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 MIR708-201ENST00000390708 88 ntBASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 AL645733.1-201ENST00000402250 217 ntBASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 VTA1P1-201ENST00000414044 866 ntBASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 HSFY7P-201ENST00000432672 318 ntBASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 VN1R54P-201ENST00000435210 1049 ntBASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 HSFY8P-201ENST00000437934 318 ntBASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 PRPF38AP2-201ENST00000438179 851 ntBASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 AL645939.1-201ENST00000453429 797 ntBASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 HSFY5P-201ENST00000453726 309 ntBASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 AC093166.2-201ENST00000455969 1017 ntBASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 GYG1P1-201ENST00000460864 698 ntBASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 RN7SL517P-201ENST00000462240 305 ntBASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 ECM1P2-201ENST00000503354 1577 ntBASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 INTS6P1-201ENST00000504674 2530 ntBASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 RNU5A-7P-201ENST00000515979 116 ntBASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 AC022882.1-201ENST00000532142 501 ntBASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 GLRXP2-201ENST00000555594 321 ntBASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 AC090751.1-201ENST00000566966 267 ntBASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 MEMO1P5-201ENST00000604810 406 ntBASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 AC087783.2-201ENST00000605070 562 ntBASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 AC005377.1-201ENST00000605126 456 ntBASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 AC010680.4-201ENST00000605334 543 ntBASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 AC026979.4-201ENST00000606555 645 ntBASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 AP001521.2-201ENST00000608772 546 ntBASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 AC112694.2-201ENST00000623697 768 ntBASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.59□□□□□ -1.67
NUP54Q7Z3B4 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.68
NUP54Q7Z3B4 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.59□□□□□ -1.68
NUP54Q7Z3B4 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.59□□□□□ -1.68
NUP54Q7Z3B4 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.59□□□□□ -1.68
NUP54Q7Z3B4 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.59□□□□□ -1.68
NUP54Q7Z3B4 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
NUP54Q7Z3B4 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.58□□□□□ -1.68
NUP54Q7Z3B4 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms