Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 AC145350.1-201ENST00000567426 208 ntBASIC4.55□□□□□ -1.68
SHFQ7M4L6 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 MIR4675-201ENST00000577898 77 ntBASIC4.55□□□□□ -1.68
SHFQ7M4L6 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 AP005432.2-201ENST00000608162 586 ntBASIC4.55□□□□□ -1.68
SHFQ7M4L6 RNA5SP440-201ENST00000612665 119 ntBASIC4.55□□□□□ -1.68
SHFQ7M4L6 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 AC139769.3-201ENST00000618383 175 ntBASIC4.55□□□□□ -1.68
SHFQ7M4L6 AP002782.1-201ENST00000623107 614 ntBASIC4.55□□□□□ -1.68
SHFQ7M4L6 AC109454.4-201ENST00000623411 649 ntBASIC4.55□□□□□ -1.68
SHFQ7M4L6 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHFQ7M4L6 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHFQ7M4L6 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHFQ7M4L6 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHFQ7M4L6 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHFQ7M4L6 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SHFQ7M4L6 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 DDX18P4-201ENST00000511690 1966 ntBASIC4.54□□□□□ -1.68
SHFQ7M4L6 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 OR51H2P-202ENST00000641424 3046 ntBASIC4.54□□□□□ -1.68
SHFQ7M4L6 AC104446.1-201ENST00000613728 1321 ntBASIC4.54□□□□□ -1.68
SHFQ7M4L6 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHFQ7M4L6 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHFQ7M4L6 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 SNORA67-201ENST00000384423 137 ntBASIC4.54□□□□□ -1.68
SHFQ7M4L6 MIR525-201ENST00000384978 85 ntBASIC4.54□□□□□ -1.68
SHFQ7M4L6 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 AL079342.2-201ENST00000403367 482 ntBASIC4.54□□□□□ -1.68
SHFQ7M4L6 AL390774.1-201ENST00000411924 246 ntBASIC4.54□□□□□ -1.68
SHFQ7M4L6 ELOCP9-201ENST00000418624 239 ntBASIC4.54□□□□□ -1.68
SHFQ7M4L6 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 EI24P4-201ENST00000423683 1078 ntBASIC4.54□□□□□ -1.68
SHFQ7M4L6 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.54□□□□□ -1.68
SHFQ7M4L6 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 HIGD1AP4-201ENST00000430194 280 ntBASIC4.54□□□□□ -1.68
SHFQ7M4L6 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHFQ7M4L6 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 CYCSP12-201ENST00000437729 300 ntBASIC4.54□□□□□ -1.68
SHFQ7M4L6 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 AL589765.3-201ENST00000446084 462 ntBASIC4.54□□□□□ -1.68
SHFQ7M4L6 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 HMGB1P4-201ENST00000455362 567 ntBASIC4.54□□□□□ -1.68
SHFQ7M4L6 Z92846.1-201ENST00000456203 268 ntBASIC4.54□□□□□ -1.68
SHFQ7M4L6 USP9YP25-201ENST00000457708 443 ntBASIC4.54□□□□□ -1.68
SHFQ7M4L6 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 HMGB1P23-201ENST00000518743 568 ntBASIC4.54□□□□□ -1.68
SHFQ7M4L6 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 AC022882.1-201ENST00000532142 501 ntBASIC4.54□□□□□ -1.68
SHFQ7M4L6 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 RN7SL52P-201ENST00000584271 284 ntBASIC4.54□□□□□ -1.68
SHFQ7M4L6 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 AC008521.2-201ENST00000591021 259 ntBASIC4.54□□□□□ -1.68
SHFQ7M4L6 AP001542.2-201ENST00000593141 364 ntBASIC4.54□□□□□ -1.68
SHFQ7M4L6 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 AC024257.5-201ENST00000612739 531 ntBASIC4.54□□□□□ -1.68
SHFQ7M4L6 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.54□□□□□ -1.68
SHFQ7M4L6 MIR1910-201ENST00000636955 80 ntBASIC4.54□□□□□ -1.68
SHFQ7M4L6 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.54□□□□□ -1.68
SHFQ7M4L6 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHFQ7M4L6 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHFQ7M4L6 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHFQ7M4L6 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHFQ7M4L6 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.53□□□□□ -1.68
SHFQ7M4L6 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
SHFQ7M4L6 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHFQ7M4L6 AC000367.1-201ENST00000452711 1766 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms