Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 AC111193.1-201ENST00000504097 155 ntBASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 HMGB1P23-201ENST00000518743 568 ntBASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 RN7SL339P-201ENST00000580597 296 ntBASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 AC209154.1-201ENST00000582156 337 ntBASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 AC012616.1-201ENST00000600294 197 ntBASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 AC091057.3-201ENST00000602684 733 ntBASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 AC022079.2-201ENST00000619739 566 ntBASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 AC093875.1-201ENST00000623688 504 ntBASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 AC015726.3-201ENST00000624501 418 ntBASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 Z73965.1-201ENST00000623412 2297 ntBASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 AC139713.2-215ENST00000641428 5037 ntBASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 AC126755.2-208ENST00000327792 462 ntBASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 AC138969.1-213ENST00000331436 462 ntBASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 RNU5B-1-201ENST00000363286 116 ntBASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 RN7SKP113-201ENST00000363891 295 ntBASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 RNU4-2-201ENST00000365668 141 ntBASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 AL390774.1-201ENST00000411924 246 ntBASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 ARL5AP2-201ENST00000444698 533 ntBASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 BX842559.2-201ENST00000451418 605 ntBASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 AL035407.2-201ENST00000454090 378 ntBASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 RPL5P30-201ENST00000465511 891 ntBASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 AC104164.3-201ENST00000467363 1258 ntBASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 HMGB1P44-201ENST00000508597 572 ntBASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 RNU6-276P-201ENST00000516114 96 ntBASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 AC118942.1-201ENST00000529674 1035 ntBASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 OR11J2P-201ENST00000555298 907 ntBASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 AP005403.1-201ENST00000579720 229 ntBASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 MIR4512-201ENST00000583257 77 ntBASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 AC069431.2-201ENST00000604149 1099 ntBASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 AC009027.1-201ENST00000604510 479 ntBASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 Z82195.1-201ENST00000604558 398 ntBASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 AC011374.2-201ENST00000607135 526 ntBASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 AL050303.3-201ENST00000613704 284 ntBASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 AC123768.4-201ENST00000616244 701 ntBASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 AC138907.10-201ENST00000623708 983 ntBASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 LINC01739-205ENST00000641890 573 ntBASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PDLIM3Q53GG5 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms