Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 MIR6891-201ENST00000618788 93 ntBASIC3.86□□□□□ -1.79
CCDC58Q4VC31 MIR7702-201ENST00000621931 59 ntBASIC3.86□□□□□ -1.79
CCDC58Q4VC31 C2orf27A-204ENST00000623058 969 ntBASIC3.86□□□□□ -1.79
CCDC58Q4VC31 AC138907.10-201ENST00000623708 983 ntBASIC3.86□□□□□ -1.79
CCDC58Q4VC31 MIR4302-201ENST00000638058 60 ntBASIC3.86□□□□□ -1.79
CCDC58Q4VC31 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC58Q4VC31 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC58Q4VC31 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC58Q4VC31 SDAD1P1-202ENST00000524156 2051 ntBASIC3.86□□□□□ -1.79
CCDC58Q4VC31 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC58Q4VC31 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
CCDC58Q4VC31 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC58Q4VC31 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC58Q4VC31 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC58Q4VC31 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC58Q4VC31 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC58Q4VC31 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC58Q4VC31 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC58Q4VC31 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
CCDC58Q4VC31 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CCDC58Q4VC31 AC010329.2-201ENST00000595195 2737 ntBASIC3.85□□□□□ -1.79
CCDC58Q4VC31 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC58Q4VC31 AC010132.2-201ENST00000295493 1043 ntBASIC3.85□□□□□ -1.79
CCDC58Q4VC31 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC58Q4VC31 RNA5SP191-201ENST00000362585 102 ntBASIC3.85□□□□□ -1.79
CCDC58Q4VC31 RN7SKP149-201ENST00000363008 344 ntBASIC3.85□□□□□ -1.79
CCDC58Q4VC31 MIR3065-201ENST00000390137 79 ntBASIC3.85□□□□□ -1.79
CCDC58Q4VC31 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CCDC58Q4VC31 RNU6-603P-201ENST00000411403 107 ntBASIC3.85□□□□□ -1.79
CCDC58Q4VC31 RPS20P14-201ENST00000412545 360 ntBASIC3.85□□□□□ -1.79
CCDC58Q4VC31 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC58Q4VC31 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC58Q4VC31 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC58Q4VC31 AC004074.1-201ENST00000421810 1063 ntBASIC3.85□□□□□ -1.79
CCDC58Q4VC31 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC58Q4VC31 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC58Q4VC31 RPS27AP17-201ENST00000463344 455 ntBASIC3.85□□□□□ -1.79
CCDC58Q4VC31 RPSAP50-201ENST00000481955 852 ntBASIC3.85□□□□□ -1.79
CCDC58Q4VC31 RN7SL808P-201ENST00000496066 299 ntBASIC3.85□□□□□ -1.79
CCDC58Q4VC31 RNA5SP73-201ENST00000516744 108 ntBASIC3.85□□□□□ -1.79
CCDC58Q4VC31 AP000827.1-201ENST00000527814 258 ntBASIC3.85□□□□□ -1.79
CCDC58Q4VC31 AP001804.2-201ENST00000533932 910 ntBASIC3.85□□□□□ -1.79
CCDC58Q4VC31 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.85□□□□□ -1.79
CCDC58Q4VC31 AC090888.3-201ENST00000558917 509 ntBASIC3.85□□□□□ -1.79
CCDC58Q4VC31 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.85□□□□□ -1.79
CCDC58Q4VC31 AC009117.1-201ENST00000563948 554 ntBASIC3.85□□□□□ -1.79
CCDC58Q4VC31 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.85□□□□□ -1.79
CCDC58Q4VC31 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC58Q4VC31 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC58Q4VC31 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC58Q4VC31 AL049634.3-201ENST00000604968 457 ntBASIC3.85□□□□□ -1.79
CCDC58Q4VC31 AC015922.4-201ENST00000612568 690 ntBASIC3.85□□□□□ -1.79
CCDC58Q4VC31 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC58Q4VC31 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
CCDC58Q4VC31 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.85□□□□□ -1.79
CCDC58Q4VC31 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC58Q4VC31 AC100871.1-201ENST00000507871 1456 ntBASIC3.85□□□□□ -1.79
CCDC58Q4VC31 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC58Q4VC31 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.85□□□□□ -1.79
CCDC58Q4VC31 ASNSP1-204ENST00000641977 1664 ntBASIC3.84□□□□□ -1.79
CCDC58Q4VC31 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC58Q4VC31 SNORD6-201ENST00000365444 73 ntBASIC3.84□□□□□ -1.79
CCDC58Q4VC31 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.84□□□□□ -1.79
CCDC58Q4VC31 SNORD66.1-201ENST00000391230 76 ntBASIC3.84□□□□□ -1.79
CCDC58Q4VC31 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CCDC58Q4VC31 AC009237.5-201ENST00000414271 501 ntBASIC3.84□□□□□ -1.79
CCDC58Q4VC31 AL161631.1-201ENST00000417933 486 ntBASIC3.84□□□□□ -1.79
CCDC58Q4VC31 PTP4A1P5-201ENST00000420305 455 ntBASIC3.84□□□□□ -1.79
CCDC58Q4VC31 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC58Q4VC31 AL355433.1-201ENST00000422804 300 ntBASIC3.84□□□□□ -1.79
CCDC58Q4VC31 EIF1P3-201ENST00000423841 334 ntBASIC3.84□□□□□ -1.79
CCDC58Q4VC31 AL138785.1-201ENST00000425821 331 ntBASIC3.84□□□□□ -1.79
CCDC58Q4VC31 AP001324.1-201ENST00000428553 399 ntBASIC3.84□□□□□ -1.79
CCDC58Q4VC31 HMGB3P5-201ENST00000428894 612 ntBASIC3.84□□□□□ -1.79
CCDC58Q4VC31 RPL12P28-201ENST00000430852 489 ntBASIC3.84□□□□□ -1.79
CCDC58Q4VC31 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC58Q4VC31 AL354710.1-201ENST00000453641 246 ntBASIC3.84□□□□□ -1.79
CCDC58Q4VC31 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.84□□□□□ -1.79
CCDC58Q4VC31 AC063943.1-201ENST00000465434 453 ntBASIC3.84□□□□□ -1.79
CCDC58Q4VC31 RPL7L1P8-201ENST00000469911 741 ntBASIC3.84□□□□□ -1.79
CCDC58Q4VC31 RN7SL481P-201ENST00000477764 299 ntBASIC3.84□□□□□ -1.79
CCDC58Q4VC31 STRADBP1-201ENST00000478954 1281 ntBASIC3.84□□□□□ -1.79
CCDC58Q4VC31 AC006517.1-201ENST00000480485 328 ntBASIC3.84□□□□□ -1.79
CCDC58Q4VC31 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.84□□□□□ -1.79
CCDC58Q4VC31 AC108145.1-201ENST00000503770 153 ntBASIC3.84□□□□□ -1.79
CCDC58Q4VC31 AC109458.1-201ENST00000508858 316 ntBASIC3.84□□□□□ -1.79
CCDC58Q4VC31 RNA5SP34-201ENST00000516887 130 ntBASIC3.84□□□□□ -1.79
CCDC58Q4VC31 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC58Q4VC31 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.84□□□□□ -1.79
CCDC58Q4VC31 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC58Q4VC31 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC58Q4VC31 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC58Q4VC31 AC079171.1-201ENST00000568788 914 ntBASIC3.84□□□□□ -1.79
CCDC58Q4VC31 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC58Q4VC31 AC103710.3-201ENST00000608157 948 ntBASIC3.84□□□□□ -1.79
CCDC58Q4VC31 MIR486-1-201ENST00000612171 68 ntBASIC3.84□□□□□ -1.79
CCDC58Q4VC31 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC58Q4VC31 OR2L1P-202ENST00000641567 1023 ntBASIC3.84□□□□□ -1.79
CCDC58Q4VC31 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.84□□□□□ -1.79
CCDC58Q4VC31 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms