Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.45□□□□□ -1.7
PTPN20Q4JDL3 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.45□□□□□ -1.7
PTPN20Q4JDL3 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN20Q4JDL3 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.45□□□□□ -1.7
PTPN20Q4JDL3 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.45□□□□□ -1.7
PTPN20Q4JDL3 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.45□□□□□ -1.7
PTPN20Q4JDL3 CYP4A43P-201ENST00000568156 121 ntBASIC4.45□□□□□ -1.7
PTPN20Q4JDL3 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN20Q4JDL3 MIR432-201ENST00000606207 94 ntBASIC4.45□□□□□ -1.7
PTPN20Q4JDL3 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN20Q4JDL3 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.45□□□□□ -1.7
PTPN20Q4JDL3 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.45□□□□□ -1.7
PTPN20Q4JDL3 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.45□□□□□ -1.7
PTPN20Q4JDL3 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.45□□□□□ -1.7
PTPN20Q4JDL3 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
PTPN20Q4JDL3 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN20Q4JDL3 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN20Q4JDL3 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN20Q4JDL3 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 RNA5SP366-201ENST00000365454 123 ntBASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 RPS24P12-201ENST00000402084 394 ntBASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 AL136131.1-201ENST00000406079 803 ntBASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 AL512430.2-201ENST00000406786 339 ntBASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 CHIAP3-201ENST00000423668 1133 ntBASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 AC009963.2-201ENST00000453431 138 ntBASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 AC108475.1-201ENST00000507880 950 ntBASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 AC011270.1-201ENST00000558606 583 ntBASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 AC104118.1-201ENST00000607625 1589 ntBASIC4.44□□□□□ -1.7
PTPN20Q4JDL3 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.43□□□□□ -1.7
PTPN20Q4JDL3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
PTPN20Q4JDL3 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
PTPN20Q4JDL3 RPL23AP26-201ENST00000412728 464 ntBASIC4.43□□□□□ -1.7
PTPN20Q4JDL3 GAPDHP49-201ENST00000421421 961 ntBASIC4.43□□□□□ -1.7
PTPN20Q4JDL3 AC022022.1-201ENST00000430304 178 ntBASIC4.43□□□□□ -1.7
PTPN20Q4JDL3 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.43□□□□□ -1.7
PTPN20Q4JDL3 AC073143.1-201ENST00000436316 395 ntBASIC4.43□□□□□ -1.7
PTPN20Q4JDL3 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.43□□□□□ -1.7
PTPN20Q4JDL3 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.43□□□□□ -1.7
PTPN20Q4JDL3 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.43□□□□□ -1.7
PTPN20Q4JDL3 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.43□□□□□ -1.7
PTPN20Q4JDL3 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.43□□□□□ -1.7
PTPN20Q4JDL3 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.43□□□□□ -1.7
PTPN20Q4JDL3 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.43□□□□□ -1.7
PTPN20Q4JDL3 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.43□□□□□ -1.7
PTPN20Q4JDL3 TVP23BP1-201ENST00000557500 617 ntBASIC4.43□□□□□ -1.7
PTPN20Q4JDL3 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PTPN20Q4JDL3 RN7SL176P-201ENST00000580352 264 ntBASIC4.43□□□□□ -1.7
PTPN20Q4JDL3 MIR3138-201ENST00000585238 82 ntBASIC4.43□□□□□ -1.7
PTPN20Q4JDL3 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.43□□□□□ -1.7
PTPN20Q4JDL3 AC133552.5-201ENST00000604266 540 ntBASIC4.43□□□□□ -1.7
PTPN20Q4JDL3 MIR6748-201ENST00000610433 71 ntBASIC4.43□□□□□ -1.7
PTPN20Q4JDL3 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTPN20Q4JDL3 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
PTPN20Q4JDL3 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.43□□□□□ -1.7
PTPN20Q4JDL3 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.43□□□□□ -1.7
PTPN20Q4JDL3 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
PTPN20Q4JDL3 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN20Q4JDL3 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN20Q4JDL3 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.42□□□□□ -1.7
PTPN20Q4JDL3 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN20Q4JDL3 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PTPN20Q4JDL3 RNA5SP105-201ENST00000391123 113 ntBASIC4.42□□□□□ -1.7
PTPN20Q4JDL3 FAR2P2-201ENST00000413041 594 ntBASIC4.42□□□□□ -1.7
PTPN20Q4JDL3 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.42□□□□□ -1.7
PTPN20Q4JDL3 AC009302.1-201ENST00000417147 390 ntBASIC4.42□□□□□ -1.7
PTPN20Q4JDL3 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.42□□□□□ -1.7
PTPN20Q4JDL3 EIF4EP1-201ENST00000422311 642 ntBASIC4.42□□□□□ -1.7
PTPN20Q4JDL3 FAR2P4-202ENST00000425399 584 ntBASIC4.42□□□□□ -1.7
PTPN20Q4JDL3 AC016712.1-201ENST00000431088 378 ntBASIC4.42□□□□□ -1.7
PTPN20Q4JDL3 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.42□□□□□ -1.7
PTPN20Q4JDL3 BTF3P10-201ENST00000433415 495 ntBASIC4.42□□□□□ -1.7
PTPN20Q4JDL3 MTND2P2-201ENST00000434633 945 ntBASIC4.42□□□□□ -1.7
PTPN20Q4JDL3 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.42□□□□□ -1.7
PTPN20Q4JDL3 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.42□□□□□ -1.7
PTPN20Q4JDL3 RPL23AP89-201ENST00000439324 255 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms