Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC3.76□□□□□ -1.81
HIST1H3AP68431 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.76□□□□□ -1.81
HIST1H3AP68431 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HIST1H3AP68431 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.76□□□□□ -1.81
HIST1H3AP68431 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.76□□□□□ -1.81
HIST1H3AP68431 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.76□□□□□ -1.81
HIST1H3AP68431 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.76□□□□□ -1.81
HIST1H3AP68431 MIR4715-201ENST00000584117 79 ntBASIC3.76□□□□□ -1.81
HIST1H3AP68431 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.76□□□□□ -1.81
HIST1H3AP68431 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HIST1H3AP68431 AC234771.5-201ENST00000600161 514 ntBASIC3.76□□□□□ -1.81
HIST1H3AP68431 AC068790.5-201ENST00000602741 355 ntBASIC3.76□□□□□ -1.81
HIST1H3AP68431 AL139395.1-201ENST00000603662 160 ntBASIC3.76□□□□□ -1.81
HIST1H3AP68431 MIR432-201ENST00000606207 94 ntBASIC3.76□□□□□ -1.81
HIST1H3AP68431 AC017076.1-201ENST00000607613 578 ntBASIC3.76□□□□□ -1.81
HIST1H3AP68431 AL035461.2-201ENST00000619201 524 ntBASIC3.76□□□□□ -1.81
HIST1H3AP68431 AC138907.10-201ENST00000623708 983 ntBASIC3.76□□□□□ -1.81
HIST1H3AP68431 AC140479.6-201ENST00000633535 357 ntBASIC3.76□□□□□ -1.81
HIST1H3AP68431 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
HIST1H3AP68431 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.76□□□□□ -1.81
HIST1H3AP68431 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HIST1H3AP68431 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
HIST1H3AP68431 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.76□□□□□ -1.81
HIST1H3AP68431 AL451142.2-201ENST00000429076 2090 ntBASIC3.75□□□□□ -1.81
HIST1H3AP68431 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HIST1H3AP68431 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.75□□□□□ -1.81
HIST1H3AP68431 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.75□□□□□ -1.81
HIST1H3AP68431 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.75□□□□□ -1.81
HIST1H3AP68431 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
HIST1H3AP68431 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HIST1H3AP68431 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.75□□□□□ -1.81
HIST1H3AP68431 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
HIST1H3AP68431 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
HIST1H3AP68431 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HIST1H3AP68431 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HIST1H3AP68431 RPL6P29-201ENST00000414863 865 ntBASIC3.75□□□□□ -1.81
HIST1H3AP68431 AL161631.1-201ENST00000417933 486 ntBASIC3.75□□□□□ -1.81
HIST1H3AP68431 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.75□□□□□ -1.81
HIST1H3AP68431 NANOGP6-201ENST00000429190 847 ntBASIC3.75□□□□□ -1.81
HIST1H3AP68431 AC011998.1-201ENST00000433403 117 ntBASIC3.75□□□□□ -1.81
HIST1H3AP68431 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.75□□□□□ -1.81
HIST1H3AP68431 RPL23AP52-201ENST00000439311 478 ntBASIC3.75□□□□□ -1.81
HIST1H3AP68431 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.75□□□□□ -1.81
HIST1H3AP68431 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.75□□□□□ -1.81
HIST1H3AP68431 NDUFS5P3-201ENST00000450668 321 ntBASIC3.75□□□□□ -1.81
HIST1H3AP68431 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.75□□□□□ -1.81
HIST1H3AP68431 IFNWP4-201ENST00000453148 294 ntBASIC3.75□□□□□ -1.81
HIST1H3AP68431 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.75□□□□□ -1.81
HIST1H3AP68431 AP002371.1-201ENST00000463604 433 ntBASIC3.75□□□□□ -1.81
HIST1H3AP68431 AC007686.1-201ENST00000488511 463 ntBASIC3.75□□□□□ -1.81
HIST1H3AP68431 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.75□□□□□ -1.81
HIST1H3AP68431 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC3.75□□□□□ -1.81
HIST1H3AP68431 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HIST1H3AP68431 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HIST1H3AP68431 OR5AN2P-201ENST00000534535 896 ntBASIC3.75□□□□□ -1.81
HIST1H3AP68431 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.75□□□□□ -1.81
HIST1H3AP68431 TRAV8-5-201ENST00000537369 341 ntBASIC3.75□□□□□ -1.81
HIST1H3AP68431 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.75□□□□□ -1.81
HIST1H3AP68431 FAM106CP-201ENST00000582212 507 ntBASIC3.75□□□□□ -1.81
HIST1H3AP68431 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.75□□□□□ -1.81
HIST1H3AP68431 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.75□□□□□ -1.81
HIST1H3AP68431 AL139286.1-201ENST00000604465 483 ntBASIC3.75□□□□□ -1.81
HIST1H3AP68431 AL356274.1-201ENST00000617064 410 ntBASIC3.75□□□□□ -1.81
HIST1H3AP68431 AC103858.2-201ENST00000621471 543 ntBASIC3.75□□□□□ -1.81
HIST1H3AP68431 AC067852.7-201ENST00000623270 535 ntBASIC3.75□□□□□ -1.81
HIST1H3AP68431 AC008013.2-202ENST00000637965 364 ntBASIC3.75□□□□□ -1.81
HIST1H3AP68431 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
HIST1H3AP68431 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC3.75□□□□□ -1.81
HIST1H3AP68431 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
HIST1H3AP68431 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HIST1H3AP68431 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HIST1H3AP68431 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.74□□□□□ -1.81
HIST1H3AP68431 SNORD74.4-201ENST00000364129 80 ntBASIC3.74□□□□□ -1.81
HIST1H3AP68431 AL583835.1-201ENST00000399570 407 ntBASIC3.74□□□□□ -1.81
HIST1H3AP68431 AL603766.1-201ENST00000407763 664 ntBASIC3.74□□□□□ -1.81
HIST1H3AP68431 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.74□□□□□ -1.81
HIST1H3AP68431 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HIST1H3AP68431 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.74□□□□□ -1.81
HIST1H3AP68431 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.74□□□□□ -1.81
HIST1H3AP68431 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.74□□□□□ -1.81
HIST1H3AP68431 BX119904.1-201ENST00000432026 348 ntBASIC3.74□□□□□ -1.81
HIST1H3AP68431 CEACAMP1-201ENST00000434624 1035 ntBASIC3.74□□□□□ -1.81
HIST1H3AP68431 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.74□□□□□ -1.81
HIST1H3AP68431 PHBP16-201ENST00000446318 950 ntBASIC3.74□□□□□ -1.81
HIST1H3AP68431 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.74□□□□□ -1.81
HIST1H3AP68431 AC025674.1-201ENST00000507074 324 ntBASIC3.74□□□□□ -1.81
HIST1H3AP68431 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.74□□□□□ -1.81
HIST1H3AP68431 AC010476.1-201ENST00000519111 851 ntBASIC3.74□□□□□ -1.81
HIST1H3AP68431 OR5M7P-201ENST00000526140 972 ntBASIC3.74□□□□□ -1.81
HIST1H3AP68431 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.74□□□□□ -1.81
HIST1H3AP68431 AC025946.2-201ENST00000603398 234 ntBASIC3.74□□□□□ -1.81
HIST1H3AP68431 AC123786.2-201ENST00000603459 275 ntBASIC3.74□□□□□ -1.81
HIST1H3AP68431 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.74□□□□□ -1.81
HIST1H3AP68431 AC116651.1-201ENST00000609724 556 ntBASIC3.74□□□□□ -1.81
HIST1H3AP68431 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
HIST1H3AP68431 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.74□□□□□ -1.81
HIST1H3AP68431 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
HIST1H3AP68431 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
HIST1H3AP68431 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.74□□□□□ -1.81
HIST1H3AP68431 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms