Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 CENPIP1-201ENST00000425713 902 ntBASIC3.95□□□□□ -1.78
LMO4P61968 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.95□□□□□ -1.78
LMO4P61968 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LMO4P61968 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.95□□□□□ -1.78
LMO4P61968 RPL7P33-201ENST00000444159 742 ntBASIC3.95□□□□□ -1.78
LMO4P61968 CYCSP24-201ENST00000445119 316 ntBASIC3.95□□□□□ -1.78
LMO4P61968 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC3.95□□□□□ -1.78
LMO4P61968 MRPL35P2-201ENST00000448009 511 ntBASIC3.95□□□□□ -1.78
LMO4P61968 AC243772.1-201ENST00000451620 410 ntBASIC3.95□□□□□ -1.78
LMO4P61968 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.95□□□□□ -1.78
LMO4P61968 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.95□□□□□ -1.78
LMO4P61968 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.95□□□□□ -1.78
LMO4P61968 AC092691.2-201ENST00000461787 803 ntBASIC3.95□□□□□ -1.78
LMO4P61968 OR52A4P-201ENST00000472867 958 ntBASIC3.95□□□□□ -1.78
LMO4P61968 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC3.95□□□□□ -1.78
LMO4P61968 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC3.95□□□□□ -1.78
LMO4P61968 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.95□□□□□ -1.78
LMO4P61968 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.95□□□□□ -1.78
LMO4P61968 SNORA19.3-201ENST00000516165 130 ntBASIC3.95□□□□□ -1.78
LMO4P61968 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.95□□□□□ -1.78
LMO4P61968 RPL23AP53-201ENST00000521854 457 ntBASIC3.95□□□□□ -1.78
LMO4P61968 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC3.95□□□□□ -1.78
LMO4P61968 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.95□□□□□ -1.78
LMO4P61968 OR4U1P-201ENST00000554958 912 ntBASIC3.95□□□□□ -1.78
LMO4P61968 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.95□□□□□ -1.78
LMO4P61968 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.95□□□□□ -1.78
LMO4P61968 AC023825.1-201ENST00000566704 1030 ntBASIC3.95□□□□□ -1.78
LMO4P61968 RN7SL652P-201ENST00000577769 300 ntBASIC3.95□□□□□ -1.78
LMO4P61968 AC005242.1-201ENST00000585658 438 ntBASIC3.95□□□□□ -1.78
LMO4P61968 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.95□□□□□ -1.78
LMO4P61968 RPL26P30-202ENST00000602923 645 ntBASIC3.95□□□□□ -1.78
LMO4P61968 AC073091.2-201ENST00000603205 907 ntBASIC3.95□□□□□ -1.78
LMO4P61968 AC015849.2-201ENST00000605738 409 ntBASIC3.95□□□□□ -1.78
LMO4P61968 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.95□□□□□ -1.78
LMO4P61968 MIR1264-201ENST00000616374 69 ntBASIC3.95□□□□□ -1.78
LMO4P61968 AC231759.1-201ENST00000616455 597 ntBASIC3.95□□□□□ -1.78
LMO4P61968 BX005214.3-202ENST00000619809 325 ntBASIC3.95□□□□□ -1.78
LMO4P61968 AL669942.2-201ENST00000620352 697 ntBASIC3.95□□□□□ -1.78
LMO4P61968 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.95□□□□□ -1.78
LMO4P61968 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.95□□□□□ -1.78
LMO4P61968 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.95□□□□□ -1.78
LMO4P61968 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC3.95□□□□□ -1.78
LMO4P61968 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
LMO4P61968 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LMO4P61968 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.95□□□□□ -1.78
LMO4P61968 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
LMO4P61968 ADAM24P-201ENST00000398655 2101 ntBASIC3.95□□□□□ -1.78
LMO4P61968 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
LMO4P61968 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
LMO4P61968 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LMO4P61968 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
LMO4P61968 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LMO4P61968 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LMO4P61968 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
LMO4P61968 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
LMO4P61968 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.95□□□□□ -1.78
LMO4P61968 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LMO4P61968 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC3.95□□□□□ -1.78
LMO4P61968 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LMO4P61968 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LMO4P61968 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
LMO4P61968 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LMO4P61968 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LMO4P61968 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
LMO4P61968 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
LMO4P61968 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LMO4P61968 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LMO4P61968 TCP1P3-201ENST00000414406 1498 ntBASIC3.94□□□□□ -1.78
LMO4P61968 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LMO4P61968 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC3.94□□□□□ -1.78
LMO4P61968 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LMO4P61968 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LMO4P61968 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
LMO4P61968 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LMO4P61968 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
LMO4P61968 MIR16-2-201ENST00000362117 81 ntBASIC3.94□□□□□ -1.78
LMO4P61968 RNA5SP397-201ENST00000391323 118 ntBASIC3.94□□□□□ -1.78
LMO4P61968 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.94□□□□□ -1.78
LMO4P61968 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.94□□□□□ -1.78
LMO4P61968 RNA5SP498-201ENST00000411342 120 ntBASIC3.94□□□□□ -1.78
LMO4P61968 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.94□□□□□ -1.78
LMO4P61968 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.94□□□□□ -1.78
LMO4P61968 AC241520.1-201ENST00000422654 1099 ntBASIC3.94□□□□□ -1.78
LMO4P61968 RPL23AP1-201ENST00000428990 471 ntBASIC3.94□□□□□ -1.78
LMO4P61968 CNOT7P1-201ENST00000429006 852 ntBASIC3.94□□□□□ -1.78
LMO4P61968 PTP4A1P3-201ENST00000433661 420 ntBASIC3.94□□□□□ -1.78
LMO4P61968 RNFT1P2-201ENST00000443064 757 ntBASIC3.94□□□□□ -1.78
LMO4P61968 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
LMO4P61968 AC012512.1-201ENST00000446594 718 ntBASIC3.94□□□□□ -1.78
LMO4P61968 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.94□□□□□ -1.78
LMO4P61968 AL031313.1-201ENST00000448435 256 ntBASIC3.94□□□□□ -1.78
LMO4P61968 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC3.94□□□□□ -1.78
LMO4P61968 AL354710.1-201ENST00000453641 246 ntBASIC3.94□□□□□ -1.78
LMO4P61968 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.94□□□□□ -1.78
LMO4P61968 MYL12BP2-201ENST00000503948 512 ntBASIC3.94□□□□□ -1.78
LMO4P61968 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC3.94□□□□□ -1.78
LMO4P61968 HPRT1P1-201ENST00000509498 657 ntBASIC3.94□□□□□ -1.78
LMO4P61968 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.94□□□□□ -1.78
LMO4P61968 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.94□□□□□ -1.78
LMO4P61968 MTND4LP31-201ENST00000514859 294 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms