Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.15□□□□□ -1.91
CKS1BP61024 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CKS1BP61024 SNRPCP2-201ENST00000504370 475 ntBASIC3.15□□□□□ -1.91
CKS1BP61024 AC098799.3-201ENST00000506095 438 ntBASIC3.15□□□□□ -1.91
CKS1BP61024 AC090568.1-201ENST00000509499 856 ntBASIC3.15□□□□□ -1.91
CKS1BP61024 AC015795.1-201ENST00000513669 327 ntBASIC3.15□□□□□ -1.91
CKS1BP61024 AC108471.1-201ENST00000513977 287 ntBASIC3.15□□□□□ -1.91
CKS1BP61024 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC3.15□□□□□ -1.91
CKS1BP61024 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC3.15□□□□□ -1.91
CKS1BP61024 OR4A46P-201ENST00000527255 933 ntBASIC3.15□□□□□ -1.91
CKS1BP61024 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.15□□□□□ -1.91
CKS1BP61024 AC133555.2-201ENST00000550213 292 ntBASIC3.15□□□□□ -1.91
CKS1BP61024 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC3.15□□□□□ -1.91
CKS1BP61024 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC3.15□□□□□ -1.91
CKS1BP61024 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.15□□□□□ -1.91
CKS1BP61024 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.15□□□□□ -1.91
CKS1BP61024 AC011487.3-201ENST00000593607 453 ntBASIC3.15□□□□□ -1.91
CKS1BP61024 AL713998.2-201ENST00000604538 1198 ntBASIC3.15□□□□□ -1.91
CKS1BP61024 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.15□□□□□ -1.91
CKS1BP61024 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.15□□□□□ -1.91
CKS1BP61024 AP001521.2-201ENST00000608772 546 ntBASIC3.15□□□□□ -1.91
CKS1BP61024 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CKS1BP61024 MIR8058-201ENST00000615737 89 ntBASIC3.15□□□□□ -1.91
CKS1BP61024 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC3.15□□□□□ -1.91
CKS1BP61024 MIR6861-201ENST00000618657 64 ntBASIC3.15□□□□□ -1.91
CKS1BP61024 AP003400.2-201ENST00000624036 666 ntBASIC3.15□□□□□ -1.91
CKS1BP61024 CR381572.2-201ENST00000624852 397 ntBASIC3.15□□□□□ -1.91
CKS1BP61024 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC3.15□□□□□ -1.91
CKS1BP61024 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CKS1BP61024 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.15□□□□□ -1.91
CKS1BP61024 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CKS1BP61024 DCAF13P1-201ENST00000495256 1330 ntBASIC3.15□□□□□ -1.91
CKS1BP61024 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
CKS1BP61024 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CKS1BP61024 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CKS1BP61024 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CKS1BP61024 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CKS1BP61024 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
CKS1BP61024 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CKS1BP61024 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.14□□□□□ -1.91
CKS1BP61024 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CKS1BP61024 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CKS1BP61024 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
CKS1BP61024 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CKS1BP61024 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CKS1BP61024 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CKS1BP61024 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CKS1BP61024 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CKS1BP61024 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CKS1BP61024 AC067945.1-201ENST00000342609 618 ntBASIC3.14□□□□□ -1.91
CKS1BP61024 RNA5SP242-201ENST00000364171 118 ntBASIC3.14□□□□□ -1.91
CKS1BP61024 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CKS1BP61024 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CKS1BP61024 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC3.14□□□□□ -1.91
CKS1BP61024 IL6-206ENST00000407492 926 ntTSL 3 BASIC3.14□□□□□ -1.91
CKS1BP61024 U3.36-201ENST00000408418 213 ntBASIC3.14□□□□□ -1.91
CKS1BP61024 RN7SKP100-201ENST00000411258 284 ntBASIC3.14□□□□□ -1.91
CKS1BP61024 TRGV6-201ENST00000417928 299 ntBASIC3.14□□□□□ -1.91
CKS1BP61024 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CKS1BP61024 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CKS1BP61024 OR52B5P-201ENST00000435337 951 ntBASIC3.14□□□□□ -1.91
CKS1BP61024 SETP5-201ENST00000437270 562 ntBASIC3.14□□□□□ -1.91
CKS1BP61024 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.14□□□□□ -1.91
CKS1BP61024 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.14□□□□□ -1.91
CKS1BP61024 AC090142.1-201ENST00000465776 462 ntBASIC3.14□□□□□ -1.91
CKS1BP61024 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.14□□□□□ -1.91
CKS1BP61024 RN7SL329P-201ENST00000467740 299 ntBASIC3.14□□□□□ -1.91
CKS1BP61024 AC140172.1-201ENST00000502928 141 ntBASIC3.14□□□□□ -1.91
CKS1BP61024 AC024558.1-201ENST00000505008 528 ntBASIC3.14□□□□□ -1.91
CKS1BP61024 AC021146.1-201ENST00000511202 716 ntBASIC3.14□□□□□ -1.91
CKS1BP61024 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC3.14□□□□□ -1.91
CKS1BP61024 RNA5SP362-201ENST00000516048 118 ntBASIC3.14□□□□□ -1.91
CKS1BP61024 RNU2-58P-201ENST00000516403 183 ntBASIC3.14□□□□□ -1.91
CKS1BP61024 RN7SKP66-201ENST00000516681 231 ntBASIC3.14□□□□□ -1.91
CKS1BP61024 RNA5SP143-201ENST00000516936 115 ntBASIC3.14□□□□□ -1.91
CKS1BP61024 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
CKS1BP61024 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CKS1BP61024 IGHVII-60-1-201ENST00000519079 256 ntBASIC3.14□□□□□ -1.91
CKS1BP61024 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC3.14□□□□□ -1.91
CKS1BP61024 RGS5-219ENST00000528019 512 ntTSL 4 BASIC3.14□□□□□ -1.91
CKS1BP61024 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.14□□□□□ -1.91
CKS1BP61024 OR10G5P-201ENST00000532733 358 ntBASIC3.14□□□□□ -1.91
CKS1BP61024 FKBP1BP1-201ENST00000553366 325 ntBASIC3.14□□□□□ -1.91
CKS1BP61024 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.14□□□□□ -1.91
CKS1BP61024 AC079171.1-201ENST00000568788 914 ntBASIC3.14□□□□□ -1.91
CKS1BP61024 AC073137.1-201ENST00000605636 634 ntBASIC3.14□□□□□ -1.91
CKS1BP61024 AC009163.6-201ENST00000612367 342 ntBASIC3.14□□□□□ -1.91
CKS1BP61024 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CKS1BP61024 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC3.14□□□□□ -1.91
CKS1BP61024 MIR1910-201ENST00000636955 80 ntBASIC3.14□□□□□ -1.91
CKS1BP61024 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC3.14□□□□□ -1.91
CKS1BP61024 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.14□□□□□ -1.91
CKS1BP61024 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CKS1BP61024 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
CKS1BP61024 ZNF962P-201ENST00000443465 3140 ntBASIC3.14□□□□□ -1.91
CKS1BP61024 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CKS1BP61024 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.14□□□□□ -1.91
CKS1BP61024 AC005183.1-201ENST00000603687 1979 ntBASIC3.14□□□□□ -1.91
CKS1BP61024 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CKS1BP61024 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms