Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN12P56749 AC108471.1-201ENST00000513977 287 ntBASIC3.72□□□□□ -1.81
CLDN12P56749 RNU6-347P-201ENST00000516658 105 ntBASIC3.72□□□□□ -1.81
CLDN12P56749 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN12P56749 OR5BC1P-201ENST00000529327 739 ntBASIC3.72□□□□□ -1.81
CLDN12P56749 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.72□□□□□ -1.81
CLDN12P56749 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.72□□□□□ -1.81
CLDN12P56749 IGKV1OR2-9-201ENST00000603957 287 ntBASIC3.72□□□□□ -1.81
CLDN12P56749 IGKV1OR2-11-201ENST00000604120 287 ntBASIC3.72□□□□□ -1.81
CLDN12P56749 AC004948.1-201ENST00000609858 672 ntBASIC3.72□□□□□ -1.81
CLDN12P56749 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.72□□□□□ -1.81
CLDN12P56749 AC123768.4-201ENST00000616244 701 ntBASIC3.72□□□□□ -1.81
CLDN12P56749 AC007546.1-201ENST00000619452 559 ntBASIC3.72□□□□□ -1.81
CLDN12P56749 AC103858.2-201ENST00000621471 543 ntBASIC3.72□□□□□ -1.81
CLDN12P56749 AC008785.1-201ENST00000624475 456 ntBASIC3.72□□□□□ -1.81
CLDN12P56749 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.72□□□□□ -1.81
CLDN12P56749 AC009950.2-201ENST00000636548 183 ntBASIC3.72□□□□□ -1.81
CLDN12P56749 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN12P56749 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN12P56749 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.72□□□□□ -1.81
CLDN12P56749 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
CLDN12P56749 AC017002.4-201ENST00000604721 1525 ntBASIC3.71□□□□□ -1.82
CLDN12P56749 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN12P56749 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN12P56749 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN12P56749 RN7SKP206-201ENST00000410823 293 ntBASIC3.71□□□□□ -1.82
CLDN12P56749 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN12P56749 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.71□□□□□ -1.82
CLDN12P56749 AC092647.1-201ENST00000420654 287 ntBASIC3.71□□□□□ -1.82
CLDN12P56749 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN12P56749 RBMY1KP-201ENST00000423480 476 ntBASIC3.71□□□□□ -1.82
CLDN12P56749 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN12P56749 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.71□□□□□ -1.82
CLDN12P56749 NDUFA5P1-201ENST00000433858 341 ntBASIC3.71□□□□□ -1.82
CLDN12P56749 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN12P56749 CCRL1P1-201ENST00000449542 1053 ntBASIC3.71□□□□□ -1.82
CLDN12P56749 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN12P56749 EIF4EBP2P1-201ENST00000450009 343 ntBASIC3.71□□□□□ -1.82
CLDN12P56749 AC239809.1-201ENST00000450470 217 ntBASIC3.71□□□□□ -1.82
CLDN12P56749 AL645939.1-201ENST00000453429 797 ntBASIC3.71□□□□□ -1.82
CLDN12P56749 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN12P56749 AL133477.1-201ENST00000457472 514 ntBASIC3.71□□□□□ -1.82
CLDN12P56749 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN12P56749 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.71□□□□□ -1.82
CLDN12P56749 AC004815.1-201ENST00000484185 331 ntBASIC3.71□□□□□ -1.82
CLDN12P56749 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.71□□□□□ -1.82
CLDN12P56749 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.71□□□□□ -1.82
CLDN12P56749 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.71□□□□□ -1.82
CLDN12P56749 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN12P56749 RNA5SP34-201ENST00000516887 130 ntBASIC3.71□□□□□ -1.82
CLDN12P56749 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN12P56749 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN12P56749 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.71□□□□□ -1.82
CLDN12P56749 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC3.71□□□□□ -1.82
CLDN12P56749 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.71□□□□□ -1.82
CLDN12P56749 VN1R84P-201ENST00000593697 235 ntBASIC3.71□□□□□ -1.82
CLDN12P56749 AL049844.2-201ENST00000604280 628 ntBASIC3.71□□□□□ -1.82
CLDN12P56749 AC012213.4-201ENST00000606457 354 ntBASIC3.71□□□□□ -1.82
CLDN12P56749 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.71□□□□□ -1.82
CLDN12P56749 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN12P56749 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC3.71□□□□□ -1.82
CLDN12P56749 MIR4302-201ENST00000638058 60 ntBASIC3.71□□□□□ -1.82
CLDN12P56749 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN12P56749 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN12P56749 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
CLDN12P56749 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.71□□□□□ -1.82
CLDN12P56749 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
CLDN12P56749 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
CLDN12P56749 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
CLDN12P56749 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN12P56749 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN12P56749 AC097504.1-201ENST00000515103 2415 ntBASIC3.71□□□□□ -1.82
CLDN12P56749 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN12P56749 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN12P56749 AC018555.1-201ENST00000567548 1980 ntBASIC3.71□□□□□ -1.82
CLDN12P56749 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN12P56749 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN12P56749 AL136964.1-201ENST00000622038 2990 ntBASIC3.7□□□□□ -1.82
CLDN12P56749 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN12P56749 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.7□□□□□ -1.82
CLDN12P56749 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN12P56749 RN7SKP149-201ENST00000363008 344 ntBASIC3.7□□□□□ -1.82
CLDN12P56749 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN12P56749 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.7□□□□□ -1.82
CLDN12P56749 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.7□□□□□ -1.82
CLDN12P56749 AL607077.1-201ENST00000401718 499 ntBASIC3.7□□□□□ -1.82
CLDN12P56749 AL139095.3-201ENST00000419672 1203 ntBASIC3.7□□□□□ -1.82
CLDN12P56749 AC073464.3-201ENST00000422564 712 ntBASIC3.7□□□□□ -1.82
CLDN12P56749 AL138785.1-201ENST00000425821 331 ntBASIC3.7□□□□□ -1.82
CLDN12P56749 RPS6P12-201ENST00000432491 726 ntBASIC3.7□□□□□ -1.82
CLDN12P56749 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.7□□□□□ -1.82
CLDN12P56749 AC114495.1-201ENST00000441274 436 ntBASIC3.7□□□□□ -1.82
CLDN12P56749 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.7□□□□□ -1.82
CLDN12P56749 HMGB3P22-202ENST00000451823 572 ntBASIC3.7□□□□□ -1.82
CLDN12P56749 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.7□□□□□ -1.82
CLDN12P56749 RN7SL808P-201ENST00000496066 299 ntBASIC3.7□□□□□ -1.82
CLDN12P56749 AC104164.2-201ENST00000496953 495 ntBASIC3.7□□□□□ -1.82
CLDN12P56749 AL592156.1-201ENST00000508758 304 ntBASIC3.7□□□□□ -1.82
CLDN12P56749 AC147055.3-201ENST00000510547 851 ntBASIC3.7□□□□□ -1.82
CLDN12P56749 AC018797.3-201ENST00000513388 1241 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms