Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
PDX1P52945 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PDX1P52945 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDX1P52945 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PDX1P52945 CCT8P1-201ENST00000413611 1657 ntBASIC4.61□□□□□ -1.67
PDX1P52945 AL592148.3-201ENST00000608771 2646 ntBASIC4.6□□□□□ -1.67
PDX1P52945 AL442639.1-201ENST00000625030 1899 ntBASIC4.6□□□□□ -1.67
PDX1P52945 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDX1P52945 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.6□□□□□ -1.67
PDX1P52945 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.6□□□□□ -1.67
PDX1P52945 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.6□□□□□ -1.67
PDX1P52945 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PDX1P52945 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
PDX1P52945 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDX1P52945 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PDX1P52945 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.6□□□□□ -1.67
PDX1P52945 AC005189.1-201ENST00000431286 310 ntBASIC4.6□□□□□ -1.67
PDX1P52945 AL035458.1-201ENST00000433096 585 ntBASIC4.6□□□□□ -1.67
PDX1P52945 MTCO1P52-201ENST00000433928 531 ntBASIC4.6□□□□□ -1.67
PDX1P52945 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.6□□□□□ -1.67
PDX1P52945 AL645931.1-201ENST00000439737 410 ntBASIC4.6□□□□□ -1.67
PDX1P52945 MTATP6P14-201ENST00000455189 673 ntBASIC4.6□□□□□ -1.67
PDX1P52945 AL133244.1-201ENST00000456007 258 ntBASIC4.6□□□□□ -1.67
PDX1P52945 TPT1P1-201ENST00000458495 518 ntBASIC4.6□□□□□ -1.67
PDX1P52945 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.6□□□□□ -1.67
PDX1P52945 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.6□□□□□ -1.67
PDX1P52945 AC083829.1-201ENST00000503756 657 ntBASIC4.6□□□□□ -1.67
PDX1P52945 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PDX1P52945 RN7SKP141-201ENST00000516167 338 ntBASIC4.6□□□□□ -1.67
PDX1P52945 RN7SKP157-201ENST00000516174 282 ntBASIC4.6□□□□□ -1.67
PDX1P52945 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.6□□□□□ -1.67
PDX1P52945 MTND1P6-201ENST00000523621 946 ntBASIC4.6□□□□□ -1.67
PDX1P52945 AP000859.1-201ENST00000525536 307 ntBASIC4.6□□□□□ -1.67
PDX1P52945 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.6□□□□□ -1.67
PDX1P52945 TOMM20P2-201ENST00000540082 421 ntBASIC4.6□□□□□ -1.67
PDX1P52945 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.6□□□□□ -1.67
PDX1P52945 AL049830.4-201ENST00000555149 351 ntBASIC4.6□□□□□ -1.67
PDX1P52945 AC068831.4-201ENST00000556118 109 ntBASIC4.6□□□□□ -1.67
PDX1P52945 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.6□□□□□ -1.67
PDX1P52945 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.6□□□□□ -1.67
PDX1P52945 MIR3936-201ENST00000584304 110 ntBASIC4.6□□□□□ -1.67
PDX1P52945 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.6□□□□□ -1.67
PDX1P52945 AC068620.3-201ENST00000602749 560 ntBASIC4.6□□□□□ -1.67
PDX1P52945 AL356218.2-201ENST00000605264 187 ntBASIC4.6□□□□□ -1.67
PDX1P52945 AC021851.1-201ENST00000608537 1082 ntBASIC4.6□□□□□ -1.67
PDX1P52945 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.6□□□□□ -1.67
PDX1P52945 RMST_10.1-201ENST00000616309 154 ntBASIC4.6□□□□□ -1.67
PDX1P52945 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.6□□□□□ -1.67
PDX1P52945 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.6□□□□□ -1.67
PDX1P52945 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
PDX1P52945 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
PDX1P52945 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PDX1P52945 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDX1P52945 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDX1P52945 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDX1P52945 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDX1P52945 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDX1P52945 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.6□□□□□ -1.67
PDX1P52945 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
PDX1P52945 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
PDX1P52945 RNA5SP447-201ENST00000363749 119 ntBASIC4.59□□□□□ -1.67
PDX1P52945 RNA5SP479-201ENST00000364858 117 ntBASIC4.59□□□□□ -1.67
PDX1P52945 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
PDX1P52945 RNU6-925P-201ENST00000384629 104 ntBASIC4.59□□□□□ -1.67
PDX1P52945 MIR320B1-201ENST00000390209 79 ntBASIC4.59□□□□□ -1.67
PDX1P52945 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PDX1P52945 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.59□□□□□ -1.67
PDX1P52945 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.59□□□□□ -1.67
PDX1P52945 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.59□□□□□ -1.67
PDX1P52945 MTCO3P4-201ENST00000419236 787 ntBASIC4.59□□□□□ -1.67
PDX1P52945 LINC00993-201ENST00000420453 540 ntBASIC4.59□□□□□ -1.67
PDX1P52945 AC023128.2-201ENST00000420880 1223 ntBASIC4.59□□□□□ -1.67
PDX1P52945 RPL12P34-201ENST00000424532 479 ntBASIC4.59□□□□□ -1.67
PDX1P52945 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PDX1P52945 AC000374.1-201ENST00000434698 1745 ntBASIC4.59□□□□□ -1.67
PDX1P52945 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.59□□□□□ -1.67
PDX1P52945 AL035551.1-201ENST00000446931 348 ntBASIC4.59□□□□□ -1.67
PDX1P52945 NUTF2P7-201ENST00000453086 375 ntBASIC4.59□□□□□ -1.67
PDX1P52945 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.59□□□□□ -1.67
PDX1P52945 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.59□□□□□ -1.67
PDX1P52945 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.59□□□□□ -1.67
PDX1P52945 NIP7P2-201ENST00000485801 544 ntBASIC4.59□□□□□ -1.67
PDX1P52945 AC010374.1-201ENST00000503762 1237 ntBASIC4.59□□□□□ -1.67
PDX1P52945 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.59□□□□□ -1.67
PDX1P52945 MTATP6P9-201ENST00000515039 680 ntBASIC4.59□□□□□ -1.67
PDX1P52945 MTCO1P15-201ENST00000529569 1526 ntBASIC4.59□□□□□ -1.67
PDX1P52945 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.59□□□□□ -1.67
PDX1P52945 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.59□□□□□ -1.67
PDX1P52945 AL109741.3-201ENST00000561748 592 ntBASIC4.59□□□□□ -1.67
PDX1P52945 VPS35P1-201ENST00000563400 1518 ntBASIC4.59□□□□□ -1.67
PDX1P52945 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PDX1P52945 AC009643.2-201ENST00000603543 1448 ntBASIC4.59□□□□□ -1.67
PDX1P52945 AC245100.7-201ENST00000609678 442 ntBASIC4.59□□□□□ -1.67
PDX1P52945 AC005962.2-201ENST00000611427 652 ntBASIC4.59□□□□□ -1.67
PDX1P52945 VN1R9P-201ENST00000614184 867 ntBASIC4.59□□□□□ -1.67
PDX1P52945 MLECP1-201ENST00000615893 709 ntBASIC4.59□□□□□ -1.67
PDX1P52945 AC145207.9-201ENST00000623802 325 ntBASIC4.59□□□□□ -1.67
PDX1P52945 AL022393.1-201ENST00000625142 1677 ntBASIC4.59□□□□□ -1.67
PDX1P52945 MIR6830-201ENST00000636015 70 ntBASIC4.59□□□□□ -1.67
PDX1P52945 MFSD8-213ENST00000641134 1327 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms