Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC139713.2-215ENST00000641428 5037 ntBASIC5□□□□□ -1.61
NEDD4P46934 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NEDD4P46934 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5□□□□□ -1.61
NEDD4P46934 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5□□□□□ -1.61
NEDD4P46934 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
NEDD4P46934 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NEDD4P46934 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NEDD4P46934 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NEDD4P46934 RNA5SP28-201ENST00000363841 119 ntBASIC4.99□□□□□ -1.61
NEDD4P46934 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.99□□□□□ -1.61
NEDD4P46934 NACAP7-201ENST00000407371 609 ntBASIC4.99□□□□□ -1.61
NEDD4P46934 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.99□□□□□ -1.61
NEDD4P46934 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.99□□□□□ -1.61
NEDD4P46934 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.99□□□□□ -1.61
NEDD4P46934 AC073335.1-201ENST00000427776 363 ntBASIC4.99□□□□□ -1.61
NEDD4P46934 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.99□□□□□ -1.61
NEDD4P46934 COX6B1P7-201ENST00000430845 235 ntBASIC4.99□□□□□ -1.61
NEDD4P46934 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.99□□□□□ -1.61
NEDD4P46934 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.99□□□□□ -1.61
NEDD4P46934 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.99□□□□□ -1.61
NEDD4P46934 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.99□□□□□ -1.61
NEDD4P46934 AF213884.1-201ENST00000488102 463 ntBASIC4.99□□□□□ -1.61
NEDD4P46934 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.99□□□□□ -1.61
NEDD4P46934 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.99□□□□□ -1.61
NEDD4P46934 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.99□□□□□ -1.61
NEDD4P46934 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.99□□□□□ -1.61
NEDD4P46934 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NEDD4P46934 SNORA26.10-201ENST00000516427 141 ntBASIC4.99□□□□□ -1.61
NEDD4P46934 AC104997.1-201ENST00000519761 717 ntBASIC4.99□□□□□ -1.61
NEDD4P46934 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.99□□□□□ -1.61
NEDD4P46934 AP003730.1-201ENST00000524605 285 ntBASIC4.99□□□□□ -1.61
NEDD4P46934 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.99□□□□□ -1.61
NEDD4P46934 AP003168.1-201ENST00000530091 307 ntBASIC4.99□□□□□ -1.61
NEDD4P46934 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.99□□□□□ -1.61
NEDD4P46934 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.99□□□□□ -1.61
NEDD4P46934 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.99□□□□□ -1.61
NEDD4P46934 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.99□□□□□ -1.61
NEDD4P46934 MIR6716-201ENST00000613413 80 ntBASIC4.99□□□□□ -1.61
NEDD4P46934 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
NEDD4P46934 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
NEDD4P46934 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
NEDD4P46934 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
NEDD4P46934 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.99□□□□□ -1.61
NEDD4P46934 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.99□□□□□ -1.61
NEDD4P46934 AC021242.1-201ENST00000507315 2035 ntBASIC4.99□□□□□ -1.61
NEDD4P46934 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
NEDD4P46934 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
NEDD4P46934 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NEDD4P46934 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.99□□□□□ -1.61
NEDD4P46934 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NEDD4P46934 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.99□□□□□ -1.61
NEDD4P46934 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.99□□□□□ -1.61
NEDD4P46934 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NEDD4P46934 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NEDD4P46934 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NEDD4P46934 CBX1P3-201ENST00000413296 527 ntBASIC4.98□□□□□ -1.61
NEDD4P46934 RAB9AP4-201ENST00000415230 609 ntBASIC4.98□□□□□ -1.61
NEDD4P46934 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.98□□□□□ -1.61
NEDD4P46934 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.98□□□□□ -1.61
NEDD4P46934 EIF1P3-201ENST00000423841 334 ntBASIC4.98□□□□□ -1.61
NEDD4P46934 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.98□□□□□ -1.61
NEDD4P46934 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.98□□□□□ -1.61
NEDD4P46934 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.98□□□□□ -1.61
NEDD4P46934 NUTF2P3-201ENST00000448540 384 ntBASIC4.98□□□□□ -1.61
NEDD4P46934 TPT1P12-201ENST00000448968 492 ntBASIC4.98□□□□□ -1.61
NEDD4P46934 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.98□□□□□ -1.61
NEDD4P46934 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.98□□□□□ -1.61
NEDD4P46934 PSMC1P13-201ENST00000458195 985 ntBASIC4.98□□□□□ -1.61
NEDD4P46934 RPS26P28-201ENST00000470806 348 ntBASIC4.98□□□□□ -1.61
NEDD4P46934 RPS29P19-201ENST00000479709 171 ntBASIC4.98□□□□□ -1.61
NEDD4P46934 MRPL49P2-201ENST00000521066 465 ntBASIC4.98□□□□□ -1.61
NEDD4P46934 AC105233.3-201ENST00000531125 744 ntBASIC4.98□□□□□ -1.61
NEDD4P46934 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.98□□□□□ -1.61
NEDD4P46934 RN7SL600P-201ENST00000581811 299 ntBASIC4.98□□□□□ -1.61
NEDD4P46934 AC009032.1-201ENST00000617574 431 ntBASIC4.98□□□□□ -1.61
NEDD4P46934 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.98□□□□□ -1.61
NEDD4P46934 AL669942.2-201ENST00000620352 697 ntBASIC4.98□□□□□ -1.61
NEDD4P46934 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NEDD4P46934 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.98□□□□□ -1.61
NEDD4P46934 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.98□□□□□ -1.61
NEDD4P46934 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
NEDD4P46934 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
NEDD4P46934 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NEDD4P46934 AC005261.4-201ENST00000600047 1385 ntBASIC4.98□□□□□ -1.61
NEDD4P46934 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
NEDD4P46934 AC091046.3-201ENST00000631455 1574 ntBASIC4.98□□□□□ -1.61
NEDD4P46934 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NEDD4P46934 AC087565.3-202ENST00000642085 1603 ntBASIC4.98□□□□□ -1.61
NEDD4P46934 RNU1-15P-201ENST00000353977 144 ntBASIC4.97□□□□□ -1.61
NEDD4P46934 RNU6-618P-201ENST00000363518 112 ntBASIC4.97□□□□□ -1.61
NEDD4P46934 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.97□□□□□ -1.61
NEDD4P46934 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NEDD4P46934 RAB28P1-201ENST00000411517 641 ntBASIC4.97□□□□□ -1.61
NEDD4P46934 AL161631.1-201ENST00000417933 486 ntBASIC4.97□□□□□ -1.61
NEDD4P46934 RSL24D1P6-201ENST00000426934 401 ntBASIC4.97□□□□□ -1.61
NEDD4P46934 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.97□□□□□ -1.61
NEDD4P46934 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NEDD4P46934 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.97□□□□□ -1.61
NEDD4P46934 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.97□□□□□ -1.61
NEDD4P46934 RPS27AP13-201ENST00000498403 237 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms