Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AL133243.3-201ENST00000617415 3004 ntBASIC4.32□□□□□ -1.72
RORAP35398 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.32□□□□□ -1.72
RORAP35398 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RORAP35398 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.32□□□□□ -1.72
RORAP35398 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.32□□□□□ -1.72
RORAP35398 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RORAP35398 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.32□□□□□ -1.72
RORAP35398 RNA5SP509-201ENST00000364577 119 ntBASIC4.32□□□□□ -1.72
RORAP35398 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.32□□□□□ -1.72
RORAP35398 AC073464.3-201ENST00000422564 712 ntBASIC4.32□□□□□ -1.72
RORAP35398 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.32□□□□□ -1.72
RORAP35398 RPS12P5-201ENST00000423449 371 ntBASIC4.32□□□□□ -1.72
RORAP35398 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RORAP35398 AL392003.1-201ENST00000434394 243 ntBASIC4.32□□□□□ -1.72
RORAP35398 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.32□□□□□ -1.72
RORAP35398 GSTA7P-201ENST00000438425 448 ntBASIC4.32□□□□□ -1.72
RORAP35398 RPS26P2-201ENST00000440331 348 ntBASIC4.32□□□□□ -1.72
RORAP35398 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.32□□□□□ -1.72
RORAP35398 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.32□□□□□ -1.72
RORAP35398 C1DP3-201ENST00000455013 423 ntBASIC4.32□□□□□ -1.72
RORAP35398 RPL31P53-201ENST00000457065 348 ntBASIC4.32□□□□□ -1.72
RORAP35398 HMGN1P8-201ENST00000463578 288 ntBASIC4.32□□□□□ -1.72
RORAP35398 AC108751.2-201ENST00000469993 231 ntBASIC4.32□□□□□ -1.72
RORAP35398 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
RORAP35398 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RORAP35398 AK4P6-201ENST00000505168 528 ntBASIC4.32□□□□□ -1.72
RORAP35398 AC147055.1-201ENST00000509261 750 ntBASIC4.32□□□□□ -1.72
RORAP35398 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.32□□□□□ -1.72
RORAP35398 AC093840.1-201ENST00000511599 336 ntBASIC4.32□□□□□ -1.72
RORAP35398 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.32□□□□□ -1.72
RORAP35398 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.32□□□□□ -1.72
RORAP35398 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.32□□□□□ -1.72
RORAP35398 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.32□□□□□ -1.72
RORAP35398 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.32□□□□□ -1.72
RORAP35398 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.32□□□□□ -1.72
RORAP35398 PSMA6P4-201ENST00000603247 718 ntBASIC4.32□□□□□ -1.72
RORAP35398 AC010200.2-201ENST00000605098 235 ntBASIC4.32□□□□□ -1.72
RORAP35398 AC005962.2-201ENST00000611427 652 ntBASIC4.32□□□□□ -1.72
RORAP35398 MLECP1-201ENST00000615893 709 ntBASIC4.32□□□□□ -1.72
RORAP35398 AL121890.3-201ENST00000618494 516 ntBASIC4.32□□□□□ -1.72
RORAP35398 AC055839.1-201ENST00000634467 498 ntBASIC4.32□□□□□ -1.72
RORAP35398 MIR6715B-201ENST00000637172 77 ntBASIC4.32□□□□□ -1.72
RORAP35398 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.32□□□□□ -1.72
RORAP35398 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
RORAP35398 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RORAP35398 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RORAP35398 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
RORAP35398 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RORAP35398 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RORAP35398 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.32□□□□□ -1.72
RORAP35398 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RORAP35398 CCT8P1-201ENST00000413611 1657 ntBASIC4.32□□□□□ -1.72
RORAP35398 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RORAP35398 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RORAP35398 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RORAP35398 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
RORAP35398 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.31□□□□□ -1.72
RORAP35398 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
RORAP35398 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RORAP35398 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
RORAP35398 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RORAP35398 OR56B2P-201ENST00000317102 954 ntBASIC4.31□□□□□ -1.72
RORAP35398 MIR448-201ENST00000362131 111 ntBASIC4.31□□□□□ -1.72
RORAP35398 RNU1-83P-201ENST00000363426 164 ntBASIC4.31□□□□□ -1.72
RORAP35398 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.31□□□□□ -1.72
RORAP35398 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RORAP35398 AL049693.1-201ENST00000402760 611 ntBASIC4.31□□□□□ -1.72
RORAP35398 AL450992.3-201ENST00000413192 568 ntBASIC4.31□□□□□ -1.72
RORAP35398 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.31□□□□□ -1.72
RORAP35398 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.31□□□□□ -1.72
RORAP35398 AC234779.1-201ENST00000425910 285 ntBASIC4.31□□□□□ -1.72
RORAP35398 RSL24D1P6-201ENST00000426934 401 ntBASIC4.31□□□□□ -1.72
RORAP35398 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RORAP35398 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.31□□□□□ -1.72
RORAP35398 AC093716.1-201ENST00000435923 377 ntBASIC4.31□□□□□ -1.72
RORAP35398 RPL23AP93-201ENST00000440847 484 ntBASIC4.31□□□□□ -1.72
RORAP35398 RPL23AP24-201ENST00000458203 385 ntBASIC4.31□□□□□ -1.72
RORAP35398 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.31□□□□□ -1.72
RORAP35398 AC010469.1-201ENST00000463864 576 ntBASIC4.31□□□□□ -1.72
RORAP35398 RPL21P126-201ENST00000470049 478 ntBASIC4.31□□□□□ -1.72
RORAP35398 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.31□□□□□ -1.72
RORAP35398 DEFB109F-201ENST00000491870 277 ntBASIC4.31□□□□□ -1.72
RORAP35398 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RORAP35398 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.31□□□□□ -1.72
RORAP35398 AC083829.1-201ENST00000503756 657 ntBASIC4.31□□□□□ -1.72
RORAP35398 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.31□□□□□ -1.72
RORAP35398 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.31□□□□□ -1.72
RORAP35398 PARP1P2-201ENST00000556806 195 ntBASIC4.31□□□□□ -1.72
RORAP35398 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.31□□□□□ -1.72
RORAP35398 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.31□□□□□ -1.72
RORAP35398 AL590392.1-201ENST00000604960 446 ntBASIC4.31□□□□□ -1.72
RORAP35398 AC012213.4-201ENST00000606457 354 ntBASIC4.31□□□□□ -1.72
RORAP35398 AC012557.1-201ENST00000607115 611 ntBASIC4.31□□□□□ -1.72
RORAP35398 AC090948.1-201ENST00000607464 549 ntBASIC4.31□□□□□ -1.72
RORAP35398 MIR6830-201ENST00000636015 70 ntBASIC4.31□□□□□ -1.72
RORAP35398 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.31□□□□□ -1.72
RORAP35398 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.31□□□□□ -1.72
RORAP35398 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
RORAP35398 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RORAP35398 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms