Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.91□□□□□ -1.62
CTNNA1P35221 RPL21P43-201ENST00000425440 472 ntBASIC4.91□□□□□ -1.62
CTNNA1P35221 AC105402.2-201ENST00000438503 358 ntBASIC4.91□□□□□ -1.62
CTNNA1P35221 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.91□□□□□ -1.62
CTNNA1P35221 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.91□□□□□ -1.62
CTNNA1P35221 AC112498.1-201ENST00000444401 332 ntBASIC4.91□□□□□ -1.62
CTNNA1P35221 TRY2P-201ENST00000448860 689 ntBASIC4.91□□□□□ -1.62
CTNNA1P35221 AC073850.1-201ENST00000449243 255 ntBASIC4.91□□□□□ -1.62
CTNNA1P35221 RPS5P7-201ENST00000456664 608 ntBASIC4.91□□□□□ -1.62
CTNNA1P35221 ATP5G1P3-201ENST00000463301 410 ntBASIC4.91□□□□□ -1.62
CTNNA1P35221 AC008953.1-201ENST00000497334 318 ntBASIC4.91□□□□□ -1.62
CTNNA1P35221 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.91□□□□□ -1.62
CTNNA1P35221 AC006499.3-201ENST00000506077 748 ntBASIC4.91□□□□□ -1.62
CTNNA1P35221 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.91□□□□□ -1.62
CTNNA1P35221 RN7SKP82-201ENST00000516786 223 ntBASIC4.91□□□□□ -1.62
CTNNA1P35221 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.91□□□□□ -1.62
CTNNA1P35221 COX6B1P6-201ENST00000522347 255 ntBASIC4.91□□□□□ -1.62
CTNNA1P35221 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.91□□□□□ -1.62
CTNNA1P35221 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.91□□□□□ -1.62
CTNNA1P35221 DYNLL1P4-201ENST00000549314 266 ntBASIC4.91□□□□□ -1.62
CTNNA1P35221 GLRXP2-201ENST00000555594 321 ntBASIC4.91□□□□□ -1.62
CTNNA1P35221 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.91□□□□□ -1.62
CTNNA1P35221 AC233280.2-201ENST00000603917 1070 ntBASIC4.91□□□□□ -1.62
CTNNA1P35221 AL121612.2-201ENST00000612261 482 ntBASIC4.91□□□□□ -1.62
CTNNA1P35221 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.91□□□□□ -1.62
CTNNA1P35221 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.91□□□□□ -1.62
CTNNA1P35221 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CTNNA1P35221 FRG1DP-201ENST00000635586 771 ntBASIC4.91□□□□□ -1.62
CTNNA1P35221 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CTNNA1P35221 AL442639.1-201ENST00000625030 1899 ntBASIC4.91□□□□□ -1.62
CTNNA1P35221 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.91□□□□□ -1.62
CTNNA1P35221 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.91□□□□□ -1.62
CTNNA1P35221 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CTNNA1P35221 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CTNNA1P35221 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CTNNA1P35221 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.91□□□□□ -1.62
CTNNA1P35221 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CTNNA1P35221 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CTNNA1P35221 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.91□□□□□ -1.62
CTNNA1P35221 MFSD8-220ENST00000641243 1422 ntBASIC4.9□□□□□ -1.62
CTNNA1P35221 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
CTNNA1P35221 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CTNNA1P35221 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CTNNA1P35221 AL136164.3-201ENST00000624429 3978 ntBASIC4.9□□□□□ -1.62
CTNNA1P35221 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.9□□□□□ -1.62
CTNNA1P35221 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
CTNNA1P35221 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CTNNA1P35221 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.9□□□□□ -1.63
CTNNA1P35221 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CTNNA1P35221 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CTNNA1P35221 UBE2V1P15-201ENST00000407776 448 ntBASIC4.9□□□□□ -1.63
CTNNA1P35221 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.9□□□□□ -1.63
CTNNA1P35221 MORF4L1P7-201ENST00000426038 703 ntBASIC4.9□□□□□ -1.63
CTNNA1P35221 AC023347.2-201ENST00000433994 462 ntBASIC4.9□□□□□ -1.63
CTNNA1P35221 RPS27P5-201ENST00000444247 244 ntBASIC4.9□□□□□ -1.63
CTNNA1P35221 AC010733.1-201ENST00000451515 401 ntBASIC4.9□□□□□ -1.63
CTNNA1P35221 EIF2S2P5-201ENST00000457635 968 ntBASIC4.9□□□□□ -1.63
CTNNA1P35221 RPL7AP28-201ENST00000464513 571 ntBASIC4.9□□□□□ -1.63
CTNNA1P35221 AC090142.1-201ENST00000465776 462 ntBASIC4.9□□□□□ -1.63
CTNNA1P35221 RPL23AP65-201ENST00000475608 468 ntBASIC4.9□□□□□ -1.63
CTNNA1P35221 TRBV8-2-201ENST00000475637 270 ntBASIC4.9□□□□□ -1.63
CTNNA1P35221 AC108729.2-201ENST00000476543 840 ntBASIC4.9□□□□□ -1.63
CTNNA1P35221 NPM1P17-201ENST00000479221 602 ntBASIC4.9□□□□□ -1.63
CTNNA1P35221 AC113430.1-201ENST00000506872 718 ntBASIC4.9□□□□□ -1.63
CTNNA1P35221 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.9□□□□□ -1.63
CTNNA1P35221 RNA5SP446-201ENST00000515955 82 ntBASIC4.9□□□□□ -1.63
CTNNA1P35221 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.9□□□□□ -1.63
CTNNA1P35221 AC008562.1-201ENST00000521763 330 ntBASIC4.9□□□□□ -1.63
CTNNA1P35221 HAUS8P1-201ENST00000549005 542 ntBASIC4.9□□□□□ -1.63
CTNNA1P35221 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.9□□□□□ -1.63
CTNNA1P35221 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.9□□□□□ -1.63
CTNNA1P35221 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.9□□□□□ -1.63
CTNNA1P35221 AC087763.1-201ENST00000603391 286 ntBASIC4.9□□□□□ -1.63
CTNNA1P35221 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.9□□□□□ -1.63
CTNNA1P35221 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.9□□□□□ -1.63
CTNNA1P35221 AC009452.1-201ENST00000640823 606 ntBASIC4.9□□□□□ -1.63
CTNNA1P35221 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.9□□□□□ -1.63
CTNNA1P35221 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
CTNNA1P35221 BRAFP1-201ENST00000445336 2703 ntBASIC4.9□□□□□ -1.63
CTNNA1P35221 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.9□□□□□ -1.63
CTNNA1P35221 SAMMSON-226ENST00000642089 1582 ntBASIC4.9□□□□□ -1.63
CTNNA1P35221 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CTNNA1P35221 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.89□□□□□ -1.63
CTNNA1P35221 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.89□□□□□ -1.63
CTNNA1P35221 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTNNA1P35221 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.89□□□□□ -1.63
CTNNA1P35221 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.89□□□□□ -1.63
CTNNA1P35221 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTNNA1P35221 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.89□□□□□ -1.63
CTNNA1P35221 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTNNA1P35221 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTNNA1P35221 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.89□□□□□ -1.63
CTNNA1P35221 RNA5SP28-201ENST00000363841 119 ntBASIC4.89□□□□□ -1.63
CTNNA1P35221 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTNNA1P35221 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTNNA1P35221 HNRNPDP2-201ENST00000406475 478 ntBASIC4.89□□□□□ -1.63
CTNNA1P35221 UBE2V1P11-201ENST00000411559 285 ntBASIC4.89□□□□□ -1.63
CTNNA1P35221 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.89□□□□□ -1.63
CTNNA1P35221 AC093162.1-201ENST00000419682 124 ntBASIC4.89□□□□□ -1.63
CTNNA1P35221 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms