Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.78□□□□□ -1.48
SMARCA1P28370 AL137845.2-201ENST00000444292 988 ntBASIC5.78□□□□□ -1.48
SMARCA1P28370 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.78□□□□□ -1.48
SMARCA1P28370 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.78□□□□□ -1.48
SMARCA1P28370 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.78□□□□□ -1.48
SMARCA1P28370 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.78□□□□□ -1.48
SMARCA1P28370 AL122001.1-201ENST00000457027 370 ntBASIC5.78□□□□□ -1.48
SMARCA1P28370 RNU7-140P-201ENST00000459546 60 ntBASIC5.78□□□□□ -1.48
SMARCA1P28370 RN7SL319P-201ENST00000480656 221 ntBASIC5.78□□□□□ -1.48
SMARCA1P28370 AC011037.1-201ENST00000483964 558 ntBASIC5.78□□□□□ -1.48
SMARCA1P28370 NDUFA5P12-201ENST00000503796 343 ntBASIC5.78□□□□□ -1.48
SMARCA1P28370 MYL12BP2-201ENST00000503948 512 ntBASIC5.78□□□□□ -1.48
SMARCA1P28370 NDUFB5P1-201ENST00000508134 564 ntBASIC5.78□□□□□ -1.48
SMARCA1P28370 RNU6-513P-201ENST00000516104 104 ntBASIC5.78□□□□□ -1.48
SMARCA1P28370 RPL23AP53-201ENST00000521854 457 ntBASIC5.78□□□□□ -1.48
SMARCA1P28370 OR4A2P-201ENST00000527276 913 ntBASIC5.78□□□□□ -1.48
SMARCA1P28370 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.78□□□□□ -1.48
SMARCA1P28370 AC069366.1-201ENST00000583159 838 ntBASIC5.78□□□□□ -1.48
SMARCA1P28370 MIR4660-201ENST00000583549 74 ntBASIC5.78□□□□□ -1.48
SMARCA1P28370 AC015688.2-201ENST00000584523 262 ntBASIC5.78□□□□□ -1.48
SMARCA1P28370 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.78□□□□□ -1.48
SMARCA1P28370 AC009948.4-201ENST00000604692 675 ntBASIC5.78□□□□□ -1.48
SMARCA1P28370 AL139344.1-201ENST00000605228 195 ntBASIC5.78□□□□□ -1.48
SMARCA1P28370 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.78□□□□□ -1.48
SMARCA1P28370 AC009237.15-201ENST00000610252 501 ntBASIC5.78□□□□□ -1.48
SMARCA1P28370 AL121890.2-201ENST00000617644 465 ntBASIC5.78□□□□□ -1.48
SMARCA1P28370 AC091304.6-201ENST00000619761 202 ntBASIC5.78□□□□□ -1.48
SMARCA1P28370 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.78□□□□□ -1.48
SMARCA1P28370 MIR6730-201ENST00000622213 67 ntBASIC5.78□□□□□ -1.48
SMARCA1P28370 AC079416.3-201ENST00000624479 549 ntBASIC5.78□□□□□ -1.48
SMARCA1P28370 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.78□□□□□ -1.48
SMARCA1P28370 CR381572.2-201ENST00000624852 397 ntBASIC5.78□□□□□ -1.48
SMARCA1P28370 AL353662.3-201ENST00000625131 237 ntBASIC5.78□□□□□ -1.48
SMARCA1P28370 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.78□□□□□ -1.48
SMARCA1P28370 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SMARCA1P28370 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SMARCA1P28370 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SMARCA1P28370 BTBD10P1-201ENST00000549824 1352 ntBASIC5.78□□□□□ -1.48
SMARCA1P28370 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
SMARCA1P28370 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.78□□□□□ -1.48
SMARCA1P28370 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SMARCA1P28370 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.77□□□□□ -1.49
SMARCA1P28370 ZNF876P-202ENST00000398732 1485 ntBASIC5.77□□□□□ -1.49
SMARCA1P28370 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SMARCA1P28370 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.77□□□□□ -1.49
SMARCA1P28370 AC011755.1-201ENST00000623763 2049 ntBASIC5.77□□□□□ -1.49
SMARCA1P28370 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SMARCA1P28370 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SMARCA1P28370 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SMARCA1P28370 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SMARCA1P28370 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.77□□□□□ -1.49
SMARCA1P28370 RNU4-44P-201ENST00000363050 141 ntBASIC5.77□□□□□ -1.49
SMARCA1P28370 RNU6-353P-201ENST00000364266 108 ntBASIC5.77□□□□□ -1.49
SMARCA1P28370 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.77□□□□□ -1.49
SMARCA1P28370 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SMARCA1P28370 AL645733.1-201ENST00000402250 217 ntBASIC5.77□□□□□ -1.49
SMARCA1P28370 VTA1P1-201ENST00000414044 866 ntBASIC5.77□□□□□ -1.49
SMARCA1P28370 AL356320.2-201ENST00000417263 507 ntBASIC5.77□□□□□ -1.49
SMARCA1P28370 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.77□□□□□ -1.49
SMARCA1P28370 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.77□□□□□ -1.49
SMARCA1P28370 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.77□□□□□ -1.49
SMARCA1P28370 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.77□□□□□ -1.49
SMARCA1P28370 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.77□□□□□ -1.49
SMARCA1P28370 EEF1A1P39-201ENST00000440791 250 ntBASIC5.77□□□□□ -1.49
SMARCA1P28370 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.77□□□□□ -1.49
SMARCA1P28370 RPL7P48-201ENST00000461513 746 ntBASIC5.77□□□□□ -1.49
SMARCA1P28370 NIFKP7-201ENST00000503365 834 ntBASIC5.77□□□□□ -1.49
SMARCA1P28370 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.77□□□□□ -1.49
SMARCA1P28370 GAPDHP56-201ENST00000506031 988 ntBASIC5.77□□□□□ -1.49
SMARCA1P28370 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SMARCA1P28370 AC110775.1-201ENST00000513721 462 ntBASIC5.77□□□□□ -1.49
SMARCA1P28370 AC108471.1-201ENST00000513977 287 ntBASIC5.77□□□□□ -1.49
SMARCA1P28370 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.77□□□□□ -1.49
SMARCA1P28370 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.77□□□□□ -1.49
SMARCA1P28370 DEFB130C-202ENST00000530001 230 ntBASIC5.77□□□□□ -1.49
SMARCA1P28370 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.77□□□□□ -1.49
SMARCA1P28370 ZNF321P-202ENST00000550843 495 ntBASIC5.77□□□□□ -1.49
SMARCA1P28370 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.77□□□□□ -1.49
SMARCA1P28370 AC023813.2-201ENST00000564321 469 ntBASIC5.77□□□□□ -1.49
SMARCA1P28370 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.77□□□□□ -1.49
SMARCA1P28370 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.77□□□□□ -1.49
SMARCA1P28370 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SMARCA1P28370 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.77□□□□□ -1.49
SMARCA1P28370 AC087783.2-201ENST00000605070 562 ntBASIC5.77□□□□□ -1.49
SMARCA1P28370 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SMARCA1P28370 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.77□□□□□ -1.49
SMARCA1P28370 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.77□□□□□ -1.49
SMARCA1P28370 AP000648.2-201ENST00000624182 404 ntBASIC5.77□□□□□ -1.49
SMARCA1P28370 AP003497.2-201ENST00000624220 967 ntBASIC5.77□□□□□ -1.49
SMARCA1P28370 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.77□□□□□ -1.49
SMARCA1P28370 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
SMARCA1P28370 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SMARCA1P28370 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SMARCA1P28370 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SMARCA1P28370 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
SMARCA1P28370 AC131971.1-201ENST00000332881 1482 ntBASIC5.77□□□□□ -1.49
SMARCA1P28370 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SMARCA1P28370 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.77□□□□□ -1.49
SMARCA1P28370 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
SMARCA1P28370 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms