Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AP004247.1-201ENST00000531556 1289 ntBASIC5.24□□□□□ -1.57
CD40P25942 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC5.24□□□□□ -1.57
CD40P25942 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.24□□□□□ -1.57
CD40P25942 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5.24□□□□□ -1.57
CD40P25942 NTS-203ENST00000551529 801 ntTSL 3 BASIC5.24□□□□□ -1.57
CD40P25942 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.24□□□□□ -1.57
CD40P25942 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.24□□□□□ -1.57
CD40P25942 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.24□□□□□ -1.57
CD40P25942 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.24□□□□□ -1.57
CD40P25942 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.24□□□□□ -1.57
CD40P25942 AGGF1P8-201ENST00000562979 1000 ntBASIC5.24□□□□□ -1.57
CD40P25942 AC136619.2-201ENST00000563361 631 ntBASIC5.24□□□□□ -1.57
CD40P25942 OR4H6P-201ENST00000563771 921 ntBASIC5.24□□□□□ -1.57
CD40P25942 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.24□□□□□ -1.57
CD40P25942 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.24□□□□□ -1.57
CD40P25942 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.24□□□□□ -1.57
CD40P25942 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.24□□□□□ -1.57
CD40P25942 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.24□□□□□ -1.57
CD40P25942 AL133338.2-201ENST00000604292 736 ntBASIC5.24□□□□□ -1.57
CD40P25942 AC098614.4-201ENST00000607601 462 ntBASIC5.24□□□□□ -1.57
CD40P25942 AC126118.1-201ENST00000607744 628 ntBASIC5.24□□□□□ -1.57
CD40P25942 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.24□□□□□ -1.57
CD40P25942 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.24□□□□□ -1.57
CD40P25942 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.24□□□□□ -1.57
CD40P25942 SNX18P12-201ENST00000624821 759 ntBASIC5.24□□□□□ -1.57
CD40P25942 CRYM-AS1-204ENST00000637983 556 ntBASIC5.24□□□□□ -1.57
CD40P25942 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CD40P25942 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.24□□□□□ -1.57
CD40P25942 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CD40P25942 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.24□□□□□ -1.57
CD40P25942 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
CD40P25942 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
CD40P25942 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
CD40P25942 AF287957.1-201ENST00000607368 1595 ntBASIC5.24□□□□□ -1.57
CD40P25942 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CD40P25942 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CD40P25942 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.24□□□□□ -1.57
CD40P25942 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
CD40P25942 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
CD40P25942 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CD40P25942 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CD40P25942 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CD40P25942 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.24□□□□□ -1.57
CD40P25942 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CD40P25942 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.23□□□□□ -1.57
CD40P25942 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CD40P25942 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.23□□□□□ -1.57
CD40P25942 AP002907.1-201ENST00000606361 1430 ntBASIC5.23□□□□□ -1.57
CD40P25942 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CD40P25942 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.23□□□□□ -1.57
CD40P25942 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC5.23□□□□□ -1.57
CD40P25942 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CD40P25942 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CD40P25942 AC012254.3-201ENST00000591183 2117 ntBASIC5.23□□□□□ -1.57
CD40P25942 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CD40P25942 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CD40P25942 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CD40P25942 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CD40P25942 AC010329.2-201ENST00000595195 2737 ntBASIC5.23□□□□□ -1.57
CD40P25942 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CD40P25942 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC5.23□□□□□ -1.57
CD40P25942 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CD40P25942 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CD40P25942 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CD40P25942 GAPDHP24-201ENST00000328713 983 ntBASIC5.23□□□□□ -1.57
CD40P25942 RNA5SP391-201ENST00000363456 119 ntBASIC5.23□□□□□ -1.57
CD40P25942 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CD40P25942 RNA5SP122-201ENST00000384457 108 ntBASIC5.23□□□□□ -1.57
CD40P25942 MIR649-201ENST00000384843 97 ntBASIC5.23□□□□□ -1.57
CD40P25942 SNORA40.3-201ENST00000390964 122 ntBASIC5.23□□□□□ -1.57
CD40P25942 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.23□□□□□ -1.57
CD40P25942 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.23□□□□□ -1.57
CD40P25942 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.23□□□□□ -1.57
CD40P25942 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.23□□□□□ -1.57
CD40P25942 AL356583.2-201ENST00000426536 280 ntBASIC5.23□□□□□ -1.57
CD40P25942 TUBB4BP6-201ENST00000437576 479 ntBASIC5.23□□□□□ -1.57
CD40P25942 SNRPEP7-201ENST00000438350 220 ntBASIC5.23□□□□□ -1.57
CD40P25942 LSM1P1-201ENST00000438629 273 ntBASIC5.23□□□□□ -1.57
CD40P25942 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.23□□□□□ -1.57
CD40P25942 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.23□□□□□ -1.57
CD40P25942 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.23□□□□□ -1.57
CD40P25942 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.23□□□□□ -1.57
CD40P25942 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CD40P25942 RNU7-136P-201ENST00000458819 69 ntBASIC5.23□□□□□ -1.57
CD40P25942 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.23□□□□□ -1.57
CD40P25942 KLF3P2-201ENST00000465138 268 ntBASIC5.23□□□□□ -1.57
CD40P25942 RN7SL165P-201ENST00000477476 291 ntBASIC5.23□□□□□ -1.57
CD40P25942 FTH1P8-201ENST00000498161 514 ntBASIC5.23□□□□□ -1.57
CD40P25942 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.23□□□□□ -1.57
CD40P25942 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CD40P25942 AC018797.3-201ENST00000513388 1241 ntBASIC5.23□□□□□ -1.57
CD40P25942 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.23□□□□□ -1.57
CD40P25942 AC105233.3-201ENST00000531125 744 ntBASIC5.23□□□□□ -1.57
CD40P25942 AC068587.4-201ENST00000533893 186 ntBASIC5.23□□□□□ -1.57
CD40P25942 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.23□□□□□ -1.57
CD40P25942 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.23□□□□□ -1.57
CD40P25942 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CD40P25942 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.23□□□□□ -1.57
CD40P25942 AL133457.1-201ENST00000564251 987 ntBASIC5.23□□□□□ -1.57
CD40P25942 AC087481.2-201ENST00000565492 330 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms