Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CYCSP28-201ENST00000534284 321 ntBASIC3.59□□□□□ -1.83
COL8A2P25067 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.59□□□□□ -1.83
COL8A2P25067 AC084824.1-201ENST00000550917 1005 ntBASIC3.59□□□□□ -1.83
COL8A2P25067 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.59□□□□□ -1.83
COL8A2P25067 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.59□□□□□ -1.83
COL8A2P25067 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.59□□□□□ -1.83
COL8A2P25067 RPL23AP97-201ENST00000568955 471 ntBASIC3.59□□□□□ -1.83
COL8A2P25067 MIR3160-1-201ENST00000577972 85 ntBASIC3.59□□□□□ -1.83
COL8A2P25067 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
COL8A2P25067 SLC25A36P1-201ENST00000590111 465 ntBASIC3.59□□□□□ -1.83
COL8A2P25067 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.59□□□□□ -1.83
COL8A2P25067 RPL7P50-201ENST00000600588 727 ntBASIC3.59□□□□□ -1.83
COL8A2P25067 AC087468.1-201ENST00000604365 630 ntBASIC3.59□□□□□ -1.83
COL8A2P25067 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.59□□□□□ -1.83
COL8A2P25067 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.59□□□□□ -1.83
COL8A2P25067 AC009237.17-201ENST00000618111 748 ntBASIC3.59□□□□□ -1.83
COL8A2P25067 AC007546.1-201ENST00000619452 559 ntBASIC3.59□□□□□ -1.83
COL8A2P25067 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
COL8A2P25067 AC112484.5-201ENST00000624189 228 ntBASIC3.59□□□□□ -1.83
COL8A2P25067 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.59□□□□□ -1.83
COL8A2P25067 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.59□□□□□ -1.83
COL8A2P25067 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.59□□□□□ -1.83
COL8A2P25067 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
COL8A2P25067 EOGT-210ENST00000615922 1931 ntBASIC3.59□□□□□ -1.83
COL8A2P25067 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
COL8A2P25067 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
COL8A2P25067 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
COL8A2P25067 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
COL8A2P25067 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
COL8A2P25067 AC091046.3-201ENST00000631455 1574 ntBASIC3.59□□□□□ -1.84
COL8A2P25067 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
COL8A2P25067 AC093909.5-201ENST00000621839 1799 ntBASIC3.58□□□□□ -1.84
COL8A2P25067 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
COL8A2P25067 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
COL8A2P25067 AL133243.3-201ENST00000617415 3004 ntBASIC3.58□□□□□ -1.84
COL8A2P25067 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL8A2P25067 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.58□□□□□ -1.84
COL8A2P25067 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
COL8A2P25067 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
COL8A2P25067 RNU1-13P-201ENST00000384499 162 ntBASIC3.58□□□□□ -1.84
COL8A2P25067 ATP5F1P2-201ENST00000398143 760 ntBASIC3.58□□□□□ -1.84
COL8A2P25067 RN7SKP263-201ENST00000411194 309 ntBASIC3.58□□□□□ -1.84
COL8A2P25067 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.58□□□□□ -1.84
COL8A2P25067 RCC2P2-201ENST00000422174 918 ntBASIC3.58□□□□□ -1.84
COL8A2P25067 AC004448.2-201ENST00000422360 586 ntBASIC3.58□□□□□ -1.84
COL8A2P25067 YY1P1-201ENST00000427625 668 ntBASIC3.58□□□□□ -1.84
COL8A2P25067 AL121578.1-201ENST00000428051 892 ntBASIC3.58□□□□□ -1.84
COL8A2P25067 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.58□□□□□ -1.84
COL8A2P25067 VN1R96P-201ENST00000446052 858 ntBASIC3.58□□□□□ -1.84
COL8A2P25067 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
COL8A2P25067 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.58□□□□□ -1.84
COL8A2P25067 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
COL8A2P25067 RPL23AP65-201ENST00000475608 468 ntBASIC3.58□□□□□ -1.84
COL8A2P25067 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.58□□□□□ -1.84
COL8A2P25067 AL592156.1-201ENST00000508758 304 ntBASIC3.58□□□□□ -1.84
COL8A2P25067 AC026402.1-201ENST00000513642 170 ntBASIC3.58□□□□□ -1.84
COL8A2P25067 AC099522.1-202ENST00000514718 367 ntBASIC3.58□□□□□ -1.84
COL8A2P25067 MIR2116-201ENST00000517221 80 ntBASIC3.58□□□□□ -1.84
COL8A2P25067 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.58□□□□□ -1.84
COL8A2P25067 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.58□□□□□ -1.84
COL8A2P25067 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.58□□□□□ -1.84
COL8A2P25067 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.58□□□□□ -1.84
COL8A2P25067 AC006116.5-201ENST00000591936 559 ntBASIC3.58□□□□□ -1.84
COL8A2P25067 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC3.58□□□□□ -1.84
COL8A2P25067 AC005034.4-201ENST00000603612 899 ntBASIC3.58□□□□□ -1.84
COL8A2P25067 AC079298.2-201ENST00000623885 459 ntBASIC3.58□□□□□ -1.84
COL8A2P25067 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.58□□□□□ -1.84
COL8A2P25067 AC008013.2-202ENST00000637965 364 ntBASIC3.58□□□□□ -1.84
COL8A2P25067 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.58□□□□□ -1.84
COL8A2P25067 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
COL8A2P25067 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
COL8A2P25067 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL8A2P25067 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL8A2P25067 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
COL8A2P25067 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
COL8A2P25067 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL8A2P25067 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.58□□□□□ -1.84
COL8A2P25067 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL8A2P25067 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL8A2P25067 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
COL8A2P25067 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL8A2P25067 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
COL8A2P25067 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL8A2P25067 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.57□□□□□ -1.84
COL8A2P25067 LAP3P1-201ENST00000403648 294 ntBASIC3.57□□□□□ -1.84
COL8A2P25067 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.57□□□□□ -1.84
COL8A2P25067 RPL17P36-201ENST00000420302 549 ntBASIC3.57□□□□□ -1.84
COL8A2P25067 EIF4EP1-201ENST00000422311 642 ntBASIC3.57□□□□□ -1.84
COL8A2P25067 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
COL8A2P25067 BTF3P10-201ENST00000433415 495 ntBASIC3.57□□□□□ -1.84
COL8A2P25067 MAPRE1P3-201ENST00000435438 796 ntBASIC3.57□□□□□ -1.84
COL8A2P25067 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.57□□□□□ -1.84
COL8A2P25067 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC3.57□□□□□ -1.84
COL8A2P25067 RPS27AP13-201ENST00000498403 237 ntBASIC3.57□□□□□ -1.84
COL8A2P25067 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC3.57□□□□□ -1.84
COL8A2P25067 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.57□□□□□ -1.84
COL8A2P25067 RNU6-943P-201ENST00000516960 98 ntBASIC3.57□□□□□ -1.84
COL8A2P25067 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.57□□□□□ -1.84
COL8A2P25067 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.57□□□□□ -1.84
COL8A2P25067 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms