Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 RN7SL390P-201ENST00000470634 284 ntBASIC8.05□□□□□ -1.12
PTPREP23469 TRBV8-2-201ENST00000475637 270 ntBASIC8.05□□□□□ -1.12
PTPREP23469 AC015524.1-201ENST00000491585 472 ntBASIC8.05□□□□□ -1.12
PTPREP23469 RN7SL568P-201ENST00000493069 298 ntBASIC8.05□□□□□ -1.12
PTPREP23469 AC104109.1-201ENST00000498563 436 ntBASIC8.05□□□□□ -1.12
PTPREP23469 GZMAP1-201ENST00000503054 631 ntBASIC8.05□□□□□ -1.12
PTPREP23469 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC8.05□□□□□ -1.12
PTPREP23469 RNU6-273P-201ENST00000516937 96 ntBASIC8.05□□□□□ -1.12
PTPREP23469 RNU6-201P-201ENST00000517100 61 ntBASIC8.05□□□□□ -1.12
PTPREP23469 IGHVIII-76-1-201ENST00000523776 286 ntBASIC8.05□□□□□ -1.12
PTPREP23469 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC8.05□□□□□ -1.12
PTPREP23469 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC8.05□□□□□ -1.12
PTPREP23469 AC092332.1-201ENST00000563684 829 ntBASIC8.05□□□□□ -1.12
PTPREP23469 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC8.05□□□□□ -1.12
PTPREP23469 MIR3910-1-201ENST00000580936 111 ntBASIC8.05□□□□□ -1.12
PTPREP23469 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC8.05□□□□□ -1.12
PTPREP23469 AC020634.1-201ENST00000608701 549 ntBASIC8.05□□□□□ -1.12
PTPREP23469 BX664608.1-201ENST00000610519 487 ntBASIC8.05□□□□□ -1.12
PTPREP23469 AC243773.3-201ENST00000613270 256 ntBASIC8.05□□□□□ -1.12
PTPREP23469 AC141273.2-201ENST00000618989 130 ntBASIC8.05□□□□□ -1.12
PTPREP23469 AC007546.1-201ENST00000619452 559 ntBASIC8.05□□□□□ -1.12
PTPREP23469 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC8.05□□□□□ -1.12
PTPREP23469 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PTPREP23469 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
PTPREP23469 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC8.05□□□□□ -1.12
PTPREP23469 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
PTPREP23469 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
PTPREP23469 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
PTPREP23469 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
PTPREP23469 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
PTPREP23469 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC8.05□□□□□ -1.12
PTPREP23469 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC8.05□□□□□ -1.12
PTPREP23469 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
PTPREP23469 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC8.04□□□□□ -1.12
PTPREP23469 SAMMSON-210ENST00000641260 1308 ntBASIC8.04□□□□□ -1.12
PTPREP23469 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC8.04□□□□□ -1.12
PTPREP23469 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC8.04□□□□□ -1.12
PTPREP23469 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
PTPREP23469 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC8.04□□□□□ -1.12
PTPREP23469 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
PTPREP23469 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC8.04□□□□□ -1.12
PTPREP23469 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC8.04□□□□□ -1.12
PTPREP23469 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
PTPREP23469 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
PTPREP23469 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
PTPREP23469 SNRPEP3-201ENST00000338402 276 ntBASIC8.04□□□□□ -1.12
PTPREP23469 OR10R3P-201ENST00000361688 942 ntBASIC8.04□□□□□ -1.12
PTPREP23469 RNU6-1017P-201ENST00000363613 106 ntBASIC8.04□□□□□ -1.12
PTPREP23469 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC8.04□□□□□ -1.12
PTPREP23469 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
PTPREP23469 Y_RNA.512-201ENST00000384518 102 ntBASIC8.04□□□□□ -1.12
PTPREP23469 SNORA7A-201ENST00000384765 139 ntBASIC8.04□□□□□ -1.12
PTPREP23469 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC8.04□□□□□ -1.12
PTPREP23469 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC8.04□□□□□ -1.12
PTPREP23469 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC8.04□□□□□ -1.12
PTPREP23469 AC128677.1-201ENST00000436016 442 ntBASIC8.04□□□□□ -1.12
PTPREP23469 AL121578.2-201ENST00000448797 447 ntBASIC8.04□□□□□ -1.12
PTPREP23469 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC8.04□□□□□ -1.12
PTPREP23469 AC079080.1-201ENST00000479841 822 ntBASIC8.04□□□□□ -1.12
PTPREP23469 RPL22P13-201ENST00000493291 347 ntBASIC8.04□□□□□ -1.12
PTPREP23469 AC131392.1-201ENST00000506490 633 ntBASIC8.04□□□□□ -1.12
PTPREP23469 AC138866.2-201ENST00000508650 584 ntBASIC8.04□□□□□ -1.12
PTPREP23469 GUSBP9-201ENST00000510138 584 ntBASIC8.04□□□□□ -1.12
PTPREP23469 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC8.04□□□□□ -1.12
PTPREP23469 RPL39P5-202ENST00000512505 151 ntBASIC8.04□□□□□ -1.12
PTPREP23469 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC8.04□□□□□ -1.12
PTPREP23469 RN7SKP24-201ENST00000515888 284 ntBASIC8.04□□□□□ -1.12
PTPREP23469 RN7SKP70-201ENST00000516655 271 ntBASIC8.04□□□□□ -1.12
PTPREP23469 RNU6-1088P-201ENST00000516850 104 ntBASIC8.04□□□□□ -1.12
PTPREP23469 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC8.04□□□□□ -1.12
PTPREP23469 AP001804.3-201ENST00000525146 880 ntBASIC8.04□□□□□ -1.12
PTPREP23469 PPIAP6-201ENST00000557078 499 ntBASIC8.04□□□□□ -1.12
PTPREP23469 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC8.04□□□□□ -1.12
PTPREP23469 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC8.04□□□□□ -1.12
PTPREP23469 MIR3942-201ENST00000585264 109 ntBASIC8.04□□□□□ -1.12
PTPREP23469 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC8.04□□□□□ -1.12
PTPREP23469 RPS11-205ENST00000599561 430 ntTSL 5 BASIC8.04□□□□□ -1.12
PTPREP23469 AL683813.2-201ENST00000605245 502 ntBASIC8.04□□□□□ -1.12
PTPREP23469 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC8.04□□□□□ -1.12
PTPREP23469 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
PTPREP23469 MIR7109-201ENST00000613748 65 ntBASIC8.04□□□□□ -1.12
PTPREP23469 AC133104.2-201ENST00000615272 193 ntBASIC8.04□□□□□ -1.12
PTPREP23469 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
PTPREP23469 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC8.04□□□□□ -1.12
PTPREP23469 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
PTPREP23469 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
PTPREP23469 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
PTPREP23469 API5P2-201ENST00000397055 1498 ntBASIC8.04□□□□□ -1.12
PTPREP23469 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
PTPREP23469 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
PTPREP23469 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
PTPREP23469 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
PTPREP23469 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
PTPREP23469 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
PTPREP23469 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
PTPREP23469 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC8.04□□□□□ -1.12
PTPREP23469 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC8.04□□□□□ -1.12
PTPREP23469 AC105074.1-201ENST00000623380 3095 ntBASIC8.04□□□□□ -1.12
PTPREP23469 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
PTPREP23469 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms