Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 MTND1P30-201ENST00000441241 901 ntBASIC5.84□□□□□ -1.47
PTPN1P18031 AL137845.2-201ENST00000444292 988 ntBASIC5.84□□□□□ -1.47
PTPN1P18031 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.84□□□□□ -1.47
PTPN1P18031 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.84□□□□□ -1.47
PTPN1P18031 RPL7P48-201ENST00000461513 746 ntBASIC5.84□□□□□ -1.47
PTPN1P18031 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTPN1P18031 AC004069.2-201ENST00000505438 1114 ntBASIC5.84□□□□□ -1.47
PTPN1P18031 AC079140.3-201ENST00000511111 550 ntBASIC5.84□□□□□ -1.47
PTPN1P18031 SCARNA21.2-201ENST00000516600 166 ntBASIC5.84□□□□□ -1.47
PTPN1P18031 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.84□□□□□ -1.47
PTPN1P18031 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.84□□□□□ -1.47
PTPN1P18031 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.84□□□□□ -1.47
PTPN1P18031 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.84□□□□□ -1.47
PTPN1P18031 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTPN1P18031 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.84□□□□□ -1.47
PTPN1P18031 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.84□□□□□ -1.47
PTPN1P18031 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.84□□□□□ -1.47
PTPN1P18031 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.84□□□□□ -1.47
PTPN1P18031 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.84□□□□□ -1.47
PTPN1P18031 AC107982.3-201ENST00000584957 985 ntBASIC5.84□□□□□ -1.47
PTPN1P18031 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.84□□□□□ -1.47
PTPN1P18031 DLEU2_1.1-201ENST00000612089 120 ntBASIC5.84□□□□□ -1.47
PTPN1P18031 DLEU2_1.2-201ENST00000614667 120 ntBASIC5.84□□□□□ -1.47
PTPN1P18031 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.84□□□□□ -1.47
PTPN1P18031 AC092192.1-201ENST00000633154 1018 ntBASIC5.84□□□□□ -1.47
PTPN1P18031 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC5.84□□□□□ -1.47
PTPN1P18031 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTPN1P18031 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.84□□□□□ -1.47
PTPN1P18031 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
PTPN1P18031 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
PTPN1P18031 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
PTPN1P18031 BCORP1-203ENST00000513194 5093 ntBASIC5.84□□□□□ -1.48
PTPN1P18031 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
PTPN1P18031 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC5.84□□□□□ -1.48
PTPN1P18031 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
PTPN1P18031 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.84□□□□□ -1.48
PTPN1P18031 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
PTPN1P18031 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.84□□□□□ -1.48
PTPN1P18031 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.48
PTPN1P18031 Z99496.1-201ENST00000469424 1477 ntBASIC5.83□□□□□ -1.48
PTPN1P18031 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTPN1P18031 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTPN1P18031 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.83□□□□□ -1.48
PTPN1P18031 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTPN1P18031 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
PTPN1P18031 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
PTPN1P18031 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTPN1P18031 AC107021.2-201ENST00000567714 2095 ntBASIC5.83□□□□□ -1.48
PTPN1P18031 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.83□□□□□ -1.48
PTPN1P18031 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.83□□□□□ -1.48
PTPN1P18031 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTPN1P18031 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTPN1P18031 RNU4-21P-201ENST00000362802 126 ntBASIC5.83□□□□□ -1.48
PTPN1P18031 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC5.83□□□□□ -1.48
PTPN1P18031 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.83□□□□□ -1.48
PTPN1P18031 AL161449.1-201ENST00000414531 1199 ntBASIC5.83□□□□□ -1.48
PTPN1P18031 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.83□□□□□ -1.48
PTPN1P18031 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.83□□□□□ -1.48
PTPN1P18031 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.83□□□□□ -1.48
PTPN1P18031 SEPT7P5-201ENST00000434048 306 ntBASIC5.83□□□□□ -1.48
PTPN1P18031 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.83□□□□□ -1.48
PTPN1P18031 CYCSP12-201ENST00000437729 300 ntBASIC5.83□□□□□ -1.48
PTPN1P18031 MTATP6P13-201ENST00000438531 667 ntBASIC5.83□□□□□ -1.48
PTPN1P18031 CACYBPP1-201ENST00000438592 684 ntBASIC5.83□□□□□ -1.48
PTPN1P18031 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.83□□□□□ -1.48
PTPN1P18031 CDC27P1-201ENST00000445384 715 ntBASIC5.83□□□□□ -1.48
PTPN1P18031 AC105399.1-202ENST00000447303 205 ntBASIC5.83□□□□□ -1.48
PTPN1P18031 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC5.83□□□□□ -1.48
PTPN1P18031 RPS23P9-201ENST00000448848 438 ntBASIC5.83□□□□□ -1.48
PTPN1P18031 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.83□□□□□ -1.48
PTPN1P18031 DDX39BP2-208ENST00000453923 258 ntBASIC5.83□□□□□ -1.48
PTPN1P18031 PNPLA4P1-201ENST00000458328 305 ntBASIC5.83□□□□□ -1.48
PTPN1P18031 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.83□□□□□ -1.48
PTPN1P18031 RPS26P39-201ENST00000469206 341 ntBASIC5.83□□□□□ -1.48
PTPN1P18031 TRBV8-2-201ENST00000475637 270 ntBASIC5.83□□□□□ -1.48
PTPN1P18031 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTPN1P18031 AC109486.1-201ENST00000486833 374 ntBASIC5.83□□□□□ -1.48
PTPN1P18031 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTPN1P18031 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.83□□□□□ -1.48
PTPN1P18031 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.83□□□□□ -1.48
PTPN1P18031 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.83□□□□□ -1.48
PTPN1P18031 POLR2KP1-201ENST00000553226 168 ntBASIC5.83□□□□□ -1.48
PTPN1P18031 NMNAT1P5-201ENST00000559657 841 ntBASIC5.83□□□□□ -1.48
PTPN1P18031 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.83□□□□□ -1.48
PTPN1P18031 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC5.83□□□□□ -1.48
PTPN1P18031 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTPN1P18031 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.83□□□□□ -1.48
PTPN1P18031 EIF1P4-201ENST00000572664 335 ntBASIC5.83□□□□□ -1.48
PTPN1P18031 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTPN1P18031 FKBP1AP1-201ENST00000594588 318 ntBASIC5.83□□□□□ -1.48
PTPN1P18031 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.83□□□□□ -1.48
PTPN1P18031 AC090181.2-201ENST00000602975 672 ntBASIC5.83□□□□□ -1.48
PTPN1P18031 AL031775.1-201ENST00000607014 887 ntBASIC5.83□□□□□ -1.48
PTPN1P18031 AL391497.1-201ENST00000608671 547 ntBASIC5.83□□□□□ -1.48
PTPN1P18031 AL512624.1-201ENST00000613638 469 ntBASIC5.83□□□□□ -1.48
PTPN1P18031 AL353726.1-201ENST00000614041 1000 ntBASIC5.83□□□□□ -1.48
PTPN1P18031 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.83□□□□□ -1.48
PTPN1P18031 AC009509.4-201ENST00000619202 509 ntBASIC5.83□□□□□ -1.48
PTPN1P18031 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.83□□□□□ -1.48
PTPN1P18031 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms