Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
VCANP13611 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.1□□□□□ -1.75
VCANP13611 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.1□□□□□ -1.75
VCANP13611 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.1□□□□□ -1.75
VCANP13611 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.1□□□□□ -1.75
VCANP13611 AL390838.2-201ENST00000602394 274 ntBASIC4.1□□□□□ -1.75
VCANP13611 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
VCANP13611 AL359922.3-201ENST00000624779 1670 ntBASIC4.09□□□□□ -1.75
VCANP13611 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VCANP13611 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VCANP13611 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VCANP13611 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
VCANP13611 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
VCANP13611 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
VCANP13611 AC009506.2-201ENST00000420635 840 ntBASIC4.09□□□□□ -1.75
VCANP13611 AC093755.1-201ENST00000512950 1023 ntBASIC4.09□□□□□ -1.75
VCANP13611 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.09□□□□□ -1.75
VCANP13611 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.09□□□□□ -1.75
VCANP13611 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VCANP13611 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
VCANP13611 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.09□□□□□ -1.75
VCANP13611 AC123769.2-201ENST00000624332 5984 ntBASIC4.09□□□□□ -1.75
VCANP13611 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.09□□□□□ -1.75
VCANP13611 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VCANP13611 AL358472.1-201ENST00000431295 329 ntBASIC4.09□□□□□ -1.76
VCANP13611 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.09□□□□□ -1.76
VCANP13611 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
VCANP13611 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
VCANP13611 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
VCANP13611 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
VCANP13611 AL136164.3-201ENST00000624429 3978 ntBASIC4.09□□□□□ -1.76
VCANP13611 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
VCANP13611 AL513548.1-201ENST00000562904 1724 ntBASIC4.09□□□□□ -1.76
VCANP13611 AL591135.1-201ENST00000401578 5914 ntBASIC4.09□□□□□ -1.76
VCANP13611 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
VCANP13611 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC4.08□□□□□ -1.76
VCANP13611 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
VCANP13611 COTL1P1-201ENST00000422309 375 ntBASIC4.08□□□□□ -1.76
VCANP13611 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
VCANP13611 RSL24D1P3-201ENST00000449255 495 ntBASIC4.08□□□□□ -1.76
VCANP13611 AC105031.1-201ENST00000518550 476 ntBASIC4.08□□□□□ -1.76
VCANP13611 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.08□□□□□ -1.76
VCANP13611 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.08□□□□□ -1.76
VCANP13611 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.08□□□□□ -1.76
VCANP13611 AC114878.2-201ENST00000604863 1251 ntBASIC4.08□□□□□ -1.76
VCANP13611 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VCANP13611 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC4.08□□□□□ -1.76
VCANP13611 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
VCANP13611 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
VCANP13611 NACAP7-201ENST00000407371 609 ntBASIC4.08□□□□□ -1.76
VCANP13611 EIF4HP2-201ENST00000424380 563 ntBASIC4.08□□□□□ -1.76
VCANP13611 HMGB1P18-201ENST00000438801 619 ntBASIC4.08□□□□□ -1.76
VCANP13611 AC087276.1-201ENST00000529659 480 ntBASIC4.08□□□□□ -1.76
VCANP13611 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC4.08□□□□□ -1.76
VCANP13611 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC4.08□□□□□ -1.76
VCANP13611 AC015914.2-201ENST00000618167 288 ntBASIC4.08□□□□□ -1.76
VCANP13611 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VCANP13611 DOCK11P1-201ENST00000553480 5932 ntBASIC4.08□□□□□ -1.76
VCANP13611 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.08□□□□□ -1.76
VCANP13611 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VCANP13611 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.08□□□□□ -1.76
VCANP13611 BMS1P3-201ENST00000372011 932 ntBASIC4.08□□□□□ -1.76
VCANP13611 MRPS33P4-201ENST00000434892 317 ntBASIC4.08□□□□□ -1.76
VCANP13611 RPL32P28-201ENST00000443577 397 ntBASIC4.08□□□□□ -1.76
VCANP13611 AL671855.1-201ENST00000446875 1203 ntBASIC4.08□□□□□ -1.76
VCANP13611 RPS29P19-201ENST00000479709 171 ntBASIC4.08□□□□□ -1.76
VCANP13611 FAM172BP-201ENST00000487497 1089 ntBASIC4.08□□□□□ -1.76
VCANP13611 KRT19P6-201ENST00000510983 209 ntBASIC4.08□□□□□ -1.76
VCANP13611 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.08□□□□□ -1.76
VCANP13611 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.08□□□□□ -1.76
VCANP13611 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
VCANP13611 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
VCANP13611 ZFRP1-201ENST00000457579 2970 ntBASIC4.07□□□□□ -1.76
VCANP13611 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.07□□□□□ -1.76
VCANP13611 HSFY4P-201ENST00000415994 1181 ntBASIC4.07□□□□□ -1.76
VCANP13611 AC093166.2-201ENST00000455969 1017 ntBASIC4.07□□□□□ -1.76
VCANP13611 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.07□□□□□ -1.76
VCANP13611 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.07□□□□□ -1.76
VCANP13611 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.07□□□□□ -1.76
VCANP13611 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
VCANP13611 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.07□□□□□ -1.76
VCANP13611 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.07□□□□□ -1.76
VCANP13611 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VCANP13611 MIR1261-201ENST00000408659 82 ntBASIC4.07□□□□□ -1.76
VCANP13611 MTND2P15-201ENST00000418575 892 ntBASIC4.07□□□□□ -1.76
VCANP13611 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.07□□□□□ -1.76
VCANP13611 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VCANP13611 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VCANP13611 RANP9-201ENST00000519957 271 ntBASIC4.07□□□□□ -1.76
VCANP13611 OR8G7P-201ENST00000616658 848 ntBASIC4.07□□□□□ -1.76
VCANP13611 AC138932.5-201ENST00000617759 563 ntBASIC4.07□□□□□ -1.76
VCANP13611 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC4.07□□□□□ -1.76
VCANP13611 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VCANP13611 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.07□□□□□ -1.76
VCANP13611 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
VCANP13611 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.07□□□□□ -1.76
VCANP13611 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
VCANP13611 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
VCANP13611 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC4.07□□□□□ -1.76
VCANP13611 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms