Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.72□□□□□ -1.65
TPM1P09493 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TPM1P09493 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
TPM1P09493 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
TPM1P09493 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.72□□□□□ -1.65
TPM1P09493 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.72□□□□□ -1.65
TPM1P09493 RNA5SP332-201ENST00000391063 115 ntBASIC4.72□□□□□ -1.65
TPM1P09493 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.72□□□□□ -1.65
TPM1P09493 PA2G4P6-201ENST00000438325 1197 ntBASIC4.72□□□□□ -1.65
TPM1P09493 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.72□□□□□ -1.65
TPM1P09493 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.72□□□□□ -1.65
TPM1P09493 RPL7AP52-201ENST00000458096 790 ntBASIC4.72□□□□□ -1.65
TPM1P09493 AC026348.1-201ENST00000462549 1053 ntBASIC4.72□□□□□ -1.65
TPM1P09493 RPL35AP15-201ENST00000468042 339 ntBASIC4.72□□□□□ -1.65
TPM1P09493 AC006517.1-201ENST00000480485 328 ntBASIC4.72□□□□□ -1.65
TPM1P09493 AC011005.3-201ENST00000491624 395 ntBASIC4.72□□□□□ -1.65
TPM1P09493 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
TPM1P09493 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.72□□□□□ -1.65
TPM1P09493 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.72□□□□□ -1.65
TPM1P09493 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.72□□□□□ -1.65
TPM1P09493 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.72□□□□□ -1.65
TPM1P09493 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.72□□□□□ -1.65
TPM1P09493 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.72□□□□□ -1.65
TPM1P09493 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.72□□□□□ -1.65
TPM1P09493 AC015722.2-201ENST00000622210 551 ntBASIC4.72□□□□□ -1.65
TPM1P09493 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.72□□□□□ -1.65
TPM1P09493 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
TPM1P09493 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.71□□□□□ -1.66
TPM1P09493 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.71□□□□□ -1.66
TPM1P09493 RNU1-89P-201ENST00000384592 164 ntBASIC4.71□□□□□ -1.66
TPM1P09493 RNA5SP397-201ENST00000391323 118 ntBASIC4.71□□□□□ -1.66
TPM1P09493 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.71□□□□□ -1.66
TPM1P09493 RPL23AP89-201ENST00000439324 255 ntBASIC4.71□□□□□ -1.66
TPM1P09493 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.71□□□□□ -1.66
TPM1P09493 NDUFS5P3-201ENST00000450668 321 ntBASIC4.71□□□□□ -1.66
TPM1P09493 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.71□□□□□ -1.66
TPM1P09493 RPL7P22-201ENST00000466005 733 ntBASIC4.71□□□□□ -1.66
TPM1P09493 AC004815.1-201ENST00000484185 331 ntBASIC4.71□□□□□ -1.66
TPM1P09493 RN7SL808P-201ENST00000496066 299 ntBASIC4.71□□□□□ -1.66
TPM1P09493 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.71□□□□□ -1.66
TPM1P09493 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.71□□□□□ -1.66
TPM1P09493 AC093763.2-201ENST00000505334 1223 ntBASIC4.71□□□□□ -1.66
TPM1P09493 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.71□□□□□ -1.66
TPM1P09493 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TPM1P09493 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.71□□□□□ -1.66
TPM1P09493 AC092851.1-201ENST00000535964 478 ntBASIC4.71□□□□□ -1.66
TPM1P09493 PCNPP1-201ENST00000552501 511 ntBASIC4.71□□□□□ -1.66
TPM1P09493 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.71□□□□□ -1.66
TPM1P09493 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.71□□□□□ -1.66
TPM1P09493 AC016180.1-201ENST00000567945 403 ntBASIC4.71□□□□□ -1.66
TPM1P09493 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
TPM1P09493 AC004825.2-201ENST00000616634 455 ntBASIC4.71□□□□□ -1.66
TPM1P09493 MIR6891-201ENST00000618788 93 ntBASIC4.71□□□□□ -1.66
TPM1P09493 NOL8P1-201ENST00000508336 3529 ntBASIC4.71□□□□□ -1.66
TPM1P09493 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
TPM1P09493 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.71□□□□□ -1.66
TPM1P09493 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TPM1P09493 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TPM1P09493 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
TPM1P09493 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TPM1P09493 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TPM1P09493 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TPM1P09493 AC010928.1-201ENST00000592477 1447 ntBASIC4.71□□□□□ -1.66
TPM1P09493 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
TPM1P09493 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TPM1P09493 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
TPM1P09493 AP001486.2-201ENST00000561652 5113 ntBASIC4.7□□□□□ -1.66
TPM1P09493 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TPM1P09493 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.7□□□□□ -1.66
TPM1P09493 AC010132.2-201ENST00000295493 1043 ntBASIC4.7□□□□□ -1.66
TPM1P09493 Y_RNA.62-201ENST00000362840 99 ntBASIC4.7□□□□□ -1.66
TPM1P09493 RNA5SP175-201ENST00000364275 119 ntBASIC4.7□□□□□ -1.66
TPM1P09493 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TPM1P09493 RNU6-1279P-201ENST00000383917 103 ntBASIC4.7□□□□□ -1.66
TPM1P09493 RNU6-225P-201ENST00000384613 103 ntBASIC4.7□□□□□ -1.66
TPM1P09493 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
TPM1P09493 MIR1179-201ENST00000408703 91 ntBASIC4.7□□□□□ -1.66
TPM1P09493 AMD1P2-201ENST00000412936 992 ntBASIC4.7□□□□□ -1.66
TPM1P09493 SNRPFP1-201ENST00000414761 252 ntBASIC4.7□□□□□ -1.66
TPM1P09493 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.7□□□□□ -1.66
TPM1P09493 RPL7P4-203ENST00000430239 730 ntBASIC4.7□□□□□ -1.66
TPM1P09493 EEF1A1P1-201ENST00000447052 739 ntBASIC4.7□□□□□ -1.66
TPM1P09493 RAB28P3-201ENST00000448325 597 ntBASIC4.7□□□□□ -1.66
TPM1P09493 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.7□□□□□ -1.66
TPM1P09493 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.7□□□□□ -1.66
TPM1P09493 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.7□□□□□ -1.66
TPM1P09493 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.7□□□□□ -1.66
TPM1P09493 AC025554.1-201ENST00000505641 188 ntBASIC4.7□□□□□ -1.66
TPM1P09493 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.7□□□□□ -1.66
TPM1P09493 OR5BC1P-201ENST00000529327 739 ntBASIC4.7□□□□□ -1.66
TPM1P09493 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
TPM1P09493 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.7□□□□□ -1.66
TPM1P09493 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.7□□□□□ -1.66
TPM1P09493 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.7□□□□□ -1.66
TPM1P09493 UBE2FP2-201ENST00000566646 462 ntBASIC4.7□□□□□ -1.66
TPM1P09493 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.7□□□□□ -1.66
TPM1P09493 MIR4737-201ENST00000583979 81 ntBASIC4.7□□□□□ -1.66
TPM1P09493 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.7□□□□□ -1.66
TPM1P09493 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.7□□□□□ -1.66
TPM1P09493 AC019131.2-201ENST00000609071 870 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms