Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.81□□□□□ -1.64
VTNP04004 MTND4LP25-201ENST00000570218 163 ntBASIC4.81□□□□□ -1.64
VTNP04004 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.81□□□□□ -1.64
VTNP04004 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.81□□□□□ -1.64
VTNP04004 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.81□□□□□ -1.64
VTNP04004 MIMT1-201ENST00000597105 1050 ntBASIC4.81□□□□□ -1.64
VTNP04004 ZYXP1-201ENST00000617638 118 ntBASIC4.81□□□□□ -1.64
VTNP04004 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
VTNP04004 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
VTNP04004 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VTNP04004 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VTNP04004 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VTNP04004 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VTNP04004 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
VTNP04004 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VTNP04004 TCP1P3-201ENST00000414406 1498 ntBASIC4.81□□□□□ -1.64
VTNP04004 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.81□□□□□ -1.64
VTNP04004 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VTNP04004 OR51H2P-202ENST00000641424 3046 ntBASIC4.8□□□□□ -1.64
VTNP04004 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
VTNP04004 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
VTNP04004 Y_RNA.126-201ENST00000363382 111 ntBASIC4.8□□□□□ -1.64
VTNP04004 RPS26P8-201ENST00000393490 348 ntBASIC4.8□□□□□ -1.64
VTNP04004 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.8□□□□□ -1.64
VTNP04004 GNG5P5-201ENST00000420444 220 ntBASIC4.8□□□□□ -1.64
VTNP04004 RPS26P2-201ENST00000440331 348 ntBASIC4.8□□□□□ -1.64
VTNP04004 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VTNP04004 TPT1P1-201ENST00000458495 518 ntBASIC4.8□□□□□ -1.64
VTNP04004 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VTNP04004 AC020898.1-201ENST00000474167 787 ntBASIC4.8□□□□□ -1.64
VTNP04004 RPL35P6-201ENST00000490024 372 ntBASIC4.8□□□□□ -1.64
VTNP04004 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.8□□□□□ -1.64
VTNP04004 AC108157.1-201ENST00000510511 539 ntBASIC4.8□□□□□ -1.64
VTNP04004 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.8□□□□□ -1.64
VTNP04004 AC112206.4-201ENST00000515142 405 ntBASIC4.8□□□□□ -1.64
VTNP04004 RNA5SP49-201ENST00000516450 115 ntBASIC4.8□□□□□ -1.64
VTNP04004 AC067904.2-201ENST00000517322 1283 ntBASIC4.8□□□□□ -1.64
VTNP04004 AP003049.1-201ENST00000529418 457 ntBASIC4.8□□□□□ -1.64
VTNP04004 AL358913.1-201ENST00000554342 121 ntBASIC4.8□□□□□ -1.64
VTNP04004 TVP23BP1-201ENST00000557500 617 ntBASIC4.8□□□□□ -1.64
VTNP04004 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.8□□□□□ -1.64
VTNP04004 AC021483.2-201ENST00000567415 758 ntBASIC4.8□□□□□ -1.64
VTNP04004 AC098483.2-201ENST00000603158 454 ntBASIC4.8□□□□□ -1.64
VTNP04004 AP002360.3-201ENST00000607673 710 ntBASIC4.8□□□□□ -1.64
VTNP04004 AL133370.2-201ENST00000619934 439 ntBASIC4.8□□□□□ -1.64
VTNP04004 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.8□□□□□ -1.64
VTNP04004 AC104260.2-201ENST00000623551 3497 ntBASIC4.8□□□□□ -1.64
VTNP04004 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.8□□□□□ -1.64
VTNP04004 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VTNP04004 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
VTNP04004 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VTNP04004 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VTNP04004 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
VTNP04004 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
VTNP04004 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
VTNP04004 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VTNP04004 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.79□□□□□ -1.64
VTNP04004 LARP1BP1-201ENST00000506036 1359 ntBASIC4.79□□□□□ -1.64
VTNP04004 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.79□□□□□ -1.64
VTNP04004 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VTNP04004 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.79□□□□□ -1.64
VTNP04004 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
VTNP04004 AC091046.3-201ENST00000631455 1574 ntBASIC4.79□□□□□ -1.64
VTNP04004 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.79□□□□□ -1.64
VTNP04004 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
VTNP04004 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
VTNP04004 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
VTNP04004 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VTNP04004 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VTNP04004 MIR921-201ENST00000401133 56 ntBASIC4.79□□□□□ -1.64
VTNP04004 RNA5SP36-201ENST00000410197 133 ntBASIC4.79□□□□□ -1.64
VTNP04004 AL358176.3-201ENST00000420757 454 ntBASIC4.79□□□□□ -1.64
VTNP04004 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.79□□□□□ -1.64
VTNP04004 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.79□□□□□ -1.64
VTNP04004 RPL23AP25-201ENST00000430973 463 ntBASIC4.79□□□□□ -1.64
VTNP04004 CDY14P-201ENST00000431260 1014 ntBASIC4.79□□□□□ -1.64
VTNP04004 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.79□□□□□ -1.64
VTNP04004 RPEP2-201ENST00000432149 701 ntBASIC4.79□□□□□ -1.64
VTNP04004 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.79□□□□□ -1.64
VTNP04004 OR4C10P-201ENST00000434991 931 ntBASIC4.79□□□□□ -1.64
VTNP04004 CDY12P-201ENST00000440679 1015 ntBASIC4.79□□□□□ -1.64
VTNP04004 CDY13P-201ENST00000445813 1015 ntBASIC4.79□□□□□ -1.64
VTNP04004 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.79□□□□□ -1.64
VTNP04004 CDY23P-201ENST00000451661 1014 ntBASIC4.79□□□□□ -1.64
VTNP04004 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.79□□□□□ -1.64
VTNP04004 DDX39BP2-208ENST00000453923 258 ntBASIC4.79□□□□□ -1.64
VTNP04004 MTND2P30-201ENST00000456663 382 ntBASIC4.79□□□□□ -1.64
VTNP04004 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.79□□□□□ -1.64
VTNP04004 AC108751.2-201ENST00000469993 231 ntBASIC4.79□□□□□ -1.64
VTNP04004 RN7SL812P-201ENST00000493791 279 ntBASIC4.79□□□□□ -1.64
VTNP04004 MTND3P3-201ENST00000505004 126 ntBASIC4.79□□□□□ -1.64
VTNP04004 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.79□□□□□ -1.64
VTNP04004 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.79□□□□□ -1.64
VTNP04004 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
VTNP04004 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.79□□□□□ -1.64
VTNP04004 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.79□□□□□ -1.64
VTNP04004 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.79□□□□□ -1.64
VTNP04004 AL020997.2-201ENST00000602607 184 ntBASIC4.79□□□□□ -1.64
VTNP04004 AL591034.3-201ENST00000605511 685 ntBASIC4.79□□□□□ -1.64
VTNP04004 AL445363.3-201ENST00000623080 671 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms