Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
COL4A1P02462 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.86□□□□□ -1.63
COL4A1P02462 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
COL4A1P02462 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
COL4A1P02462 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL4A1P02462 SNORD35B-201ENST00000363660 87 ntBASIC4.86□□□□□ -1.63
COL4A1P02462 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.86□□□□□ -1.63
COL4A1P02462 ATP5F1P4-201ENST00000397288 746 ntBASIC4.86□□□□□ -1.63
COL4A1P02462 RPL21P17-201ENST00000397467 475 ntBASIC4.86□□□□□ -1.63
COL4A1P02462 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.86□□□□□ -1.63
COL4A1P02462 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.86□□□□□ -1.63
COL4A1P02462 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.86□□□□□ -1.63
COL4A1P02462 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.86□□□□□ -1.63
COL4A1P02462 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.86□□□□□ -1.63
COL4A1P02462 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.86□□□□□ -1.63
COL4A1P02462 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.86□□□□□ -1.63
COL4A1P02462 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
COL4A1P02462 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.86□□□□□ -1.63
COL4A1P02462 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL4A1P02462 AC025627.2-201ENST00000576220 160 ntBASIC4.86□□□□□ -1.63
COL4A1P02462 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.86□□□□□ -1.63
COL4A1P02462 AL451044.1-201ENST00000604867 238 ntBASIC4.86□□□□□ -1.63
COL4A1P02462 AF001550.2-201ENST00000636643 217 ntBASIC4.86□□□□□ -1.63
COL4A1P02462 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC4.86□□□□□ -1.63
COL4A1P02462 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC4.86□□□□□ -1.63
COL4A1P02462 SAMMSON-213ENST00000641336 1521 ntBASIC4.85□□□□□ -1.63
COL4A1P02462 AC006042.3-201ENST00000454684 1469 ntBASIC4.85□□□□□ -1.63
COL4A1P02462 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL4A1P02462 RPL7P60-201ENST00000397636 735 ntBASIC4.85□□□□□ -1.63
COL4A1P02462 AC073335.1-201ENST00000427776 363 ntBASIC4.85□□□□□ -1.63
COL4A1P02462 AC006517.1-201ENST00000480485 328 ntBASIC4.85□□□□□ -1.63
COL4A1P02462 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.85□□□□□ -1.63
COL4A1P02462 AC110768.1-201ENST00000509222 400 ntBASIC4.85□□□□□ -1.63
COL4A1P02462 RNU1-95P-201ENST00000516357 160 ntBASIC4.85□□□□□ -1.63
COL4A1P02462 RNU1-128P-201ENST00000516704 160 ntBASIC4.85□□□□□ -1.63
COL4A1P02462 AC008694.2-201ENST00000517591 306 ntBASIC4.85□□□□□ -1.63
COL4A1P02462 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.85□□□□□ -1.63
COL4A1P02462 RPL21P7-201ENST00000557463 483 ntBASIC4.85□□□□□ -1.63
COL4A1P02462 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.85□□□□□ -1.63
COL4A1P02462 AC012417.1-201ENST00000582307 1039 ntBASIC4.85□□□□□ -1.63
COL4A1P02462 AC017100.2-201ENST00000584628 355 ntBASIC4.85□□□□□ -1.63
COL4A1P02462 AC005255.1-201ENST00000593748 216 ntBASIC4.85□□□□□ -1.63
COL4A1P02462 AC010487.1-201ENST00000594408 1172 ntBASIC4.85□□□□□ -1.63
COL4A1P02462 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.85□□□□□ -1.63
COL4A1P02462 SNORD91B-202ENST00000608459 222 ntBASIC4.85□□□□□ -1.63
COL4A1P02462 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.85□□□□□ -1.63
COL4A1P02462 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL4A1P02462 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.85□□□□□ -1.63
COL4A1P02462 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.85□□□□□ -1.63
COL4A1P02462 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
COL4A1P02462 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.85□□□□□ -1.63
COL4A1P02462 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
COL4A1P02462 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.85□□□□□ -1.63
COL4A1P02462 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL4A1P02462 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL4A1P02462 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL4A1P02462 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.84□□□□□ -1.63
COL4A1P02462 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL4A1P02462 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL4A1P02462 AC233289.1-201ENST00000403700 508 ntBASIC4.84□□□□□ -1.63
COL4A1P02462 SEPT7P8-201ENST00000413308 775 ntBASIC4.84□□□□□ -1.63
COL4A1P02462 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL4A1P02462 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL4A1P02462 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL4A1P02462 UBDP1-202ENST00000457888 382 ntBASIC4.84□□□□□ -1.63
COL4A1P02462 RPL7P15-201ENST00000461190 712 ntBASIC4.84□□□□□ -1.63
COL4A1P02462 RPL23AP65-201ENST00000475608 468 ntBASIC4.84□□□□□ -1.63
COL4A1P02462 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.84□□□□□ -1.63
COL4A1P02462 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.84□□□□□ -1.63
COL4A1P02462 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.84□□□□□ -1.63
COL4A1P02462 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.84□□□□□ -1.63
COL4A1P02462 RNU1-30P-201ENST00000606575 163 ntBASIC4.84□□□□□ -1.63
COL4A1P02462 AC097505.1-201ENST00000610199 565 ntBASIC4.84□□□□□ -1.63
COL4A1P02462 AC084757.4-201ENST00000616350 526 ntBASIC4.84□□□□□ -1.63
COL4A1P02462 AC015908.5-201ENST00000623289 343 ntBASIC4.84□□□□□ -1.63
COL4A1P02462 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.84□□□□□ -1.63
COL4A1P02462 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.84□□□□□ -1.63
COL4A1P02462 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL4A1P02462 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL4A1P02462 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL4A1P02462 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL4A1P02462 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL4A1P02462 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC4.84□□□□□ -1.63
COL4A1P02462 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL4A1P02462 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL4A1P02462 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
COL4A1P02462 MAPK10-286ENST00000641208 8747 ntBASIC4.84□□□□□ -1.64
COL4A1P02462 SNORA11.1-201ENST00000408133 129 ntBASIC4.83□□□□□ -1.64
COL4A1P02462 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.83□□□□□ -1.64
COL4A1P02462 AC114814.2-201ENST00000419195 485 ntBASIC4.83□□□□□ -1.64
COL4A1P02462 RBMY1KP-201ENST00000423480 476 ntBASIC4.83□□□□□ -1.64
COL4A1P02462 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.83□□□□□ -1.64
COL4A1P02462 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.83□□□□□ -1.64
COL4A1P02462 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.83□□□□□ -1.64
COL4A1P02462 FABP3P2-201ENST00000453169 399 ntBASIC4.83□□□□□ -1.64
COL4A1P02462 USP9YP2-201ENST00000504503 1000 ntBASIC4.83□□□□□ -1.64
COL4A1P02462 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL4A1P02462 USP9YP1-201ENST00000513521 1002 ntBASIC4.83□□□□□ -1.64
COL4A1P02462 NPM1P47-201ENST00000560843 856 ntBASIC4.83□□□□□ -1.64
COL4A1P02462 MIR3936-201ENST00000584304 110 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms