Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AL358472.1-201ENST00000431295 329 ntBASIC4.98□□□□□ -1.61
COL1A1P02452 RPL36AP13-201ENST00000457490 317 ntBASIC4.98□□□□□ -1.61
COL1A1P02452 RPL38P1-201ENST00000460914 211 ntBASIC4.98□□□□□ -1.61
COL1A1P02452 AC110792.1-201ENST00000491826 472 ntBASIC4.98□□□□□ -1.61
COL1A1P02452 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.98□□□□□ -1.61
COL1A1P02452 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.98□□□□□ -1.61
COL1A1P02452 HSPE1P5-201ENST00000561489 272 ntBASIC4.98□□□□□ -1.61
COL1A1P02452 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.98□□□□□ -1.61
COL1A1P02452 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.98□□□□□ -1.61
COL1A1P02452 CR392039.5-201ENST00000623201 510 ntBASIC4.98□□□□□ -1.61
COL1A1P02452 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
COL1A1P02452 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
COL1A1P02452 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
COL1A1P02452 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC4.98□□□□□ -1.61
COL1A1P02452 AC006042.3-201ENST00000454684 1469 ntBASIC4.98□□□□□ -1.61
COL1A1P02452 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COL1A1P02452 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL1A1P02452 FAM91A3P-201ENST00000456826 2544 ntBASIC4.98□□□□□ -1.61
COL1A1P02452 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL1A1P02452 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL1A1P02452 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
COL1A1P02452 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL1A1P02452 AL627171.1-201ENST00000618845 1308 ntBASIC4.97□□□□□ -1.61
COL1A1P02452 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
COL1A1P02452 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
COL1A1P02452 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL1A1P02452 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
COL1A1P02452 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL1A1P02452 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL1A1P02452 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL1A1P02452 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.97□□□□□ -1.61
COL1A1P02452 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL1A1P02452 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.97□□□□□ -1.61
COL1A1P02452 AL161631.1-201ENST00000417933 486 ntBASIC4.97□□□□□ -1.61
COL1A1P02452 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COL1A1P02452 AL500522.2-201ENST00000448562 343 ntBASIC4.97□□□□□ -1.61
COL1A1P02452 PRSS3P4-201ENST00000453323 162 ntBASIC4.97□□□□□ -1.61
COL1A1P02452 AC007688.1-201ENST00000475592 759 ntBASIC4.97□□□□□ -1.61
COL1A1P02452 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.97□□□□□ -1.61
COL1A1P02452 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.97□□□□□ -1.61
COL1A1P02452 IGLV3-26-201ENST00000520756 302 ntBASIC4.97□□□□□ -1.61
COL1A1P02452 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.97□□□□□ -1.61
COL1A1P02452 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.97□□□□□ -1.61
COL1A1P02452 AC120057.2-201ENST00000571520 271 ntBASIC4.97□□□□□ -1.61
COL1A1P02452 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.97□□□□□ -1.61
COL1A1P02452 AC008759.1-201ENST00000589783 983 ntBASIC4.97□□□□□ -1.61
COL1A1P02452 SNORA51-201ENST00000606420 132 ntBASIC4.97□□□□□ -1.61
COL1A1P02452 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.97□□□□□ -1.61
COL1A1P02452 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
COL1A1P02452 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
COL1A1P02452 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL1A1P02452 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL1A1P02452 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
COL1A1P02452 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COL1A1P02452 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.97□□□□□ -1.61
COL1A1P02452 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL1A1P02452 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.97□□□□□ -1.61
COL1A1P02452 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COL1A1P02452 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.61
COL1A1P02452 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.96□□□□□ -1.61
COL1A1P02452 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL1A1P02452 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL1A1P02452 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.96□□□□□ -1.62
COL1A1P02452 Y_RNA.333-201ENST00000365274 102 ntBASIC4.96□□□□□ -1.62
COL1A1P02452 RN7SKP97-201ENST00000410966 333 ntBASIC4.96□□□□□ -1.62
COL1A1P02452 OR5BE1P-201ENST00000425977 939 ntBASIC4.96□□□□□ -1.62
COL1A1P02452 ARL4AP4-201ENST00000434170 518 ntBASIC4.96□□□□□ -1.62
COL1A1P02452 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.96□□□□□ -1.62
COL1A1P02452 AC005008.1-201ENST00000456151 612 ntBASIC4.96□□□□□ -1.62
COL1A1P02452 PHBP17-201ENST00000528576 541 ntBASIC4.96□□□□□ -1.62
COL1A1P02452 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.96□□□□□ -1.62
COL1A1P02452 AC107982.3-201ENST00000584957 985 ntBASIC4.96□□□□□ -1.62
COL1A1P02452 AC026979.4-201ENST00000606555 645 ntBASIC4.96□□□□□ -1.62
COL1A1P02452 MIR6868-201ENST00000611215 58 ntBASIC4.96□□□□□ -1.62
COL1A1P02452 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.96□□□□□ -1.62
COL1A1P02452 OR5BE1P-202ENST00000641168 1176 ntBASIC4.96□□□□□ -1.62
COL1A1P02452 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.96□□□□□ -1.62
COL1A1P02452 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL1A1P02452 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL1A1P02452 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL1A1P02452 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.96□□□□□ -1.62
COL1A1P02452 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.96□□□□□ -1.62
COL1A1P02452 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL1A1P02452 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL1A1P02452 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
COL1A1P02452 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.96□□□□□ -1.62
COL1A1P02452 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
COL1A1P02452 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL1A1P02452 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL1A1P02452 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
COL1A1P02452 NOTCH2P1-201ENST00000443481 624 ntBASIC4.95□□□□□ -1.62
COL1A1P02452 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.95□□□□□ -1.62
COL1A1P02452 HPRT1P2-201ENST00000505250 544 ntBASIC4.95□□□□□ -1.62
COL1A1P02452 TRMT10BP1-201ENST00000519377 943 ntBASIC4.95□□□□□ -1.62
COL1A1P02452 YPEL5P3-201ENST00000547227 352 ntBASIC4.95□□□□□ -1.62
COL1A1P02452 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.95□□□□□ -1.62
COL1A1P02452 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.95□□□□□ -1.62
COL1A1P02452 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.95□□□□□ -1.62
COL1A1P02452 AC110743.1-201ENST00000584870 478 ntBASIC4.95□□□□□ -1.62
COL1A1P02452 AL606490.9-201ENST00000603331 271 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms