Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 TMX2P1-201ENST00000436507 708 ntBASIC4.71□□□□□ -1.66
PDGFBP01127 BTBD7P2-201ENST00000441962 620 ntBASIC4.71□□□□□ -1.66
PDGFBP01127 RPL7AP61-201ENST00000443410 636 ntBASIC4.71□□□□□ -1.66
PDGFBP01127 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.71□□□□□ -1.66
PDGFBP01127 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.71□□□□□ -1.66
PDGFBP01127 TPRKBP1-201ENST00000456243 481 ntBASIC4.71□□□□□ -1.66
PDGFBP01127 AC089999.1-201ENST00000460336 374 ntBASIC4.71□□□□□ -1.66
PDGFBP01127 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.71□□□□□ -1.66
PDGFBP01127 APOOP2-201ENST00000461561 539 ntBASIC4.71□□□□□ -1.66
PDGFBP01127 RPL23AP12-201ENST00000467573 473 ntBASIC4.71□□□□□ -1.66
PDGFBP01127 RPL7L1P8-201ENST00000469911 741 ntBASIC4.71□□□□□ -1.66
PDGFBP01127 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.71□□□□□ -1.66
PDGFBP01127 AC108475.1-201ENST00000507880 950 ntBASIC4.71□□□□□ -1.66
PDGFBP01127 RNU6-1004P-201ENST00000516584 111 ntBASIC4.71□□□□□ -1.66
PDGFBP01127 RNU6-889P-201ENST00000517189 103 ntBASIC4.71□□□□□ -1.66
PDGFBP01127 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.71□□□□□ -1.66
PDGFBP01127 AC092709.1-201ENST00000521355 1045 ntBASIC4.71□□□□□ -1.66
PDGFBP01127 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.71□□□□□ -1.66
PDGFBP01127 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDGFBP01127 AC012414.2-201ENST00000559474 187 ntBASIC4.71□□□□□ -1.66
PDGFBP01127 AC023158.1-201ENST00000561632 1025 ntBASIC4.71□□□□□ -1.66
PDGFBP01127 DPRXP4-201ENST00000578053 568 ntBASIC4.71□□□□□ -1.66
PDGFBP01127 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.71□□□□□ -1.66
PDGFBP01127 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.71□□□□□ -1.66
PDGFBP01127 AC073137.1-201ENST00000605636 634 ntBASIC4.71□□□□□ -1.66
PDGFBP01127 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.71□□□□□ -1.66
PDGFBP01127 AC090506.2-201ENST00000624521 419 ntBASIC4.71□□□□□ -1.66
PDGFBP01127 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.71□□□□□ -1.66
PDGFBP01127 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.71□□□□□ -1.66
PDGFBP01127 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDGFBP01127 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.71□□□□□ -1.66
PDGFBP01127 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDGFBP01127 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
PDGFBP01127 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PDGFBP01127 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PDGFBP01127 AC114546.3-201ENST00000623582 1734 ntBASIC4.71□□□□□ -1.66
PDGFBP01127 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PDGFBP01127 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.71□□□□□ -1.66
PDGFBP01127 AC112198.2-201ENST00000426589 6996 ntBASIC4.71□□□□□ -1.66
PDGFBP01127 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
PDGFBP01127 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDGFBP01127 DDX18P4-201ENST00000511690 1966 ntBASIC4.71□□□□□ -1.66
PDGFBP01127 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PDGFBP01127 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDGFBP01127 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDGFBP01127 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
PDGFBP01127 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
PDGFBP01127 AC022893.2-201ENST00000564832 3296 ntBASIC4.7□□□□□ -1.66
PDGFBP01127 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.7□□□□□ -1.66
PDGFBP01127 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.7□□□□□ -1.66
PDGFBP01127 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.7□□□□□ -1.66
PDGFBP01127 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDGFBP01127 AC011155.1-201ENST00000316512 456 ntBASIC4.7□□□□□ -1.66
PDGFBP01127 MIR383-201ENST00000362257 73 ntBASIC4.7□□□□□ -1.66
PDGFBP01127 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PDGFBP01127 OR1F12-201ENST00000402365 945 ntBASIC4.7□□□□□ -1.66
PDGFBP01127 AC079809.1-201ENST00000415468 276 ntBASIC4.7□□□□□ -1.66
PDGFBP01127 AC073136.2-201ENST00000417282 849 ntBASIC4.7□□□□□ -1.66
PDGFBP01127 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.7□□□□□ -1.66
PDGFBP01127 RPL23AP38-201ENST00000423801 469 ntBASIC4.7□□□□□ -1.66
PDGFBP01127 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.7□□□□□ -1.66
PDGFBP01127 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDGFBP01127 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.7□□□□□ -1.66
PDGFBP01127 AC006326.1-201ENST00000445465 787 ntBASIC4.7□□□□□ -1.66
PDGFBP01127 AC023271.1-201ENST00000445936 1090 ntBASIC4.7□□□□□ -1.66
PDGFBP01127 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.7□□□□□ -1.66
PDGFBP01127 AC005229.2-201ENST00000456995 399 ntBASIC4.7□□□□□ -1.66
PDGFBP01127 RPS4XP12-201ENST00000461747 709 ntBASIC4.7□□□□□ -1.66
PDGFBP01127 AC092691.2-201ENST00000461787 803 ntBASIC4.7□□□□□ -1.66
PDGFBP01127 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.7□□□□□ -1.66
PDGFBP01127 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.7□□□□□ -1.66
PDGFBP01127 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.7□□□□□ -1.66
PDGFBP01127 RNU6-347P-201ENST00000516658 105 ntBASIC4.7□□□□□ -1.66
PDGFBP01127 RNU6-709P-201ENST00000517257 104 ntBASIC4.7□□□□□ -1.66
PDGFBP01127 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.7□□□□□ -1.66
PDGFBP01127 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.7□□□□□ -1.66
PDGFBP01127 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.7□□□□□ -1.66
PDGFBP01127 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.7□□□□□ -1.66
PDGFBP01127 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.7□□□□□ -1.66
PDGFBP01127 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.7□□□□□ -1.66
PDGFBP01127 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
PDGFBP01127 NPM1P47-201ENST00000560843 856 ntBASIC4.7□□□□□ -1.66
PDGFBP01127 HNRNPCP4-201ENST00000571636 900 ntBASIC4.7□□□□□ -1.66
PDGFBP01127 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.7□□□□□ -1.66
PDGFBP01127 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.7□□□□□ -1.66
PDGFBP01127 AL163152.1-201ENST00000642001 374 ntBASIC4.7□□□□□ -1.66
PDGFBP01127 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDGFBP01127 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDGFBP01127 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.7□□□□□ -1.66
PDGFBP01127 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.7□□□□□ -1.66
PDGFBP01127 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDGFBP01127 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDGFBP01127 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDGFBP01127 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDGFBP01127 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDGFBP01127 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.69□□□□□ -1.66
PDGFBP01127 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PDGFBP01127 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDGFBP01127 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PDGFBP01127 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms