Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.52□□□□□ -1.69
ZIC3O60481 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.52□□□□□ -1.69
ZIC3O60481 NPM1P13-201ENST00000452663 865 ntBASIC4.52□□□□□ -1.69
ZIC3O60481 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.52□□□□□ -1.69
ZIC3O60481 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.52□□□□□ -1.69
ZIC3O60481 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.52□□□□□ -1.69
ZIC3O60481 VN1R40P-201ENST00000455196 941 ntBASIC4.52□□□□□ -1.69
ZIC3O60481 TRBV8-2-201ENST00000475637 270 ntBASIC4.52□□□□□ -1.69
ZIC3O60481 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ZIC3O60481 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.52□□□□□ -1.69
ZIC3O60481 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.52□□□□□ -1.69
ZIC3O60481 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.52□□□□□ -1.69
ZIC3O60481 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
ZIC3O60481 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.52□□□□□ -1.69
ZIC3O60481 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.52□□□□□ -1.69
ZIC3O60481 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.52□□□□□ -1.69
ZIC3O60481 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.52□□□□□ -1.69
ZIC3O60481 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.52□□□□□ -1.69
ZIC3O60481 MIR4675-201ENST00000577898 77 ntBASIC4.52□□□□□ -1.69
ZIC3O60481 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.52□□□□□ -1.69
ZIC3O60481 VN1R83P-201ENST00000595685 445 ntBASIC4.52□□□□□ -1.69
ZIC3O60481 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.52□□□□□ -1.69
ZIC3O60481 AC091057.2-201ENST00000602594 792 ntBASIC4.52□□□□□ -1.69
ZIC3O60481 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.52□□□□□ -1.69
ZIC3O60481 AL392112.1-201ENST00000605115 829 ntBASIC4.52□□□□□ -1.69
ZIC3O60481 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.52□□□□□ -1.69
ZIC3O60481 AL445423.1-201ENST00000609941 536 ntBASIC4.52□□□□□ -1.69
ZIC3O60481 uc_338.9-201ENST00000617424 182 ntBASIC4.52□□□□□ -1.69
ZIC3O60481 AL353662.3-201ENST00000625131 237 ntBASIC4.52□□□□□ -1.69
ZIC3O60481 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ZIC3O60481 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ZIC3O60481 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ZIC3O60481 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ZIC3O60481 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.52□□□□□ -1.69
ZIC3O60481 AC005261.4-201ENST00000600047 1385 ntBASIC4.52□□□□□ -1.69
ZIC3O60481 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
ZIC3O60481 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.51□□□□□ -1.69
ZIC3O60481 ZNF876P-202ENST00000398732 1485 ntBASIC4.51□□□□□ -1.69
ZIC3O60481 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
ZIC3O60481 RNF6P1-201ENST00000444889 1784 ntBASIC4.51□□□□□ -1.69
ZIC3O60481 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.51□□□□□ -1.69
ZIC3O60481 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.51□□□□□ -1.69
ZIC3O60481 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.51□□□□□ -1.69
ZIC3O60481 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
ZIC3O60481 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ZIC3O60481 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.51□□□□□ -1.69
ZIC3O60481 MIR525-201ENST00000384978 85 ntBASIC4.51□□□□□ -1.69
ZIC3O60481 AC013442.1-201ENST00000397347 228 ntBASIC4.51□□□□□ -1.69
ZIC3O60481 LRRC37BP1-201ENST00000398851 714 ntBASIC4.51□□□□□ -1.69
ZIC3O60481 RPL21P67-201ENST00000402896 478 ntBASIC4.51□□□□□ -1.69
ZIC3O60481 AL079342.2-201ENST00000403367 482 ntBASIC4.51□□□□□ -1.69
ZIC3O60481 MIR1303-201ENST00000408625 86 ntBASIC4.51□□□□□ -1.69
ZIC3O60481 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.51□□□□□ -1.69
ZIC3O60481 MTCO3P21-201ENST00000430791 643 ntBASIC4.51□□□□□ -1.69
ZIC3O60481 RPS27P18-201ENST00000431701 247 ntBASIC4.51□□□□□ -1.69
ZIC3O60481 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.51□□□□□ -1.69
ZIC3O60481 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.51□□□□□ -1.69
ZIC3O60481 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
ZIC3O60481 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.51□□□□□ -1.69
ZIC3O60481 RPL7P11-201ENST00000437586 658 ntBASIC4.51□□□□□ -1.69
ZIC3O60481 PRPF38AP2-201ENST00000438179 851 ntBASIC4.51□□□□□ -1.69
ZIC3O60481 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.51□□□□□ -1.69
ZIC3O60481 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.51□□□□□ -1.69
ZIC3O60481 MRPL35P4-201ENST00000453682 566 ntBASIC4.51□□□□□ -1.69
ZIC3O60481 AC004263.1-201ENST00000479327 332 ntBASIC4.51□□□□□ -1.69
ZIC3O60481 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.51□□□□□ -1.69
ZIC3O60481 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.51□□□□□ -1.69
ZIC3O60481 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.51□□□□□ -1.69
ZIC3O60481 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.51□□□□□ -1.69
ZIC3O60481 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.51□□□□□ -1.69
ZIC3O60481 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.51□□□□□ -1.69
ZIC3O60481 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.51□□□□□ -1.69
ZIC3O60481 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.51□□□□□ -1.69
ZIC3O60481 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.51□□□□□ -1.69
ZIC3O60481 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
ZIC3O60481 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.51□□□□□ -1.69
ZIC3O60481 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.51□□□□□ -1.69
ZIC3O60481 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.51□□□□□ -1.69
ZIC3O60481 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.51□□□□□ -1.69
ZIC3O60481 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.51□□□□□ -1.69
ZIC3O60481 AC145350.1-201ENST00000567426 208 ntBASIC4.51□□□□□ -1.69
ZIC3O60481 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.51□□□□□ -1.69
ZIC3O60481 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.51□□□□□ -1.69
ZIC3O60481 VN1R78P-201ENST00000597393 564 ntBASIC4.51□□□□□ -1.69
ZIC3O60481 AC024940.4-201ENST00000605507 246 ntBASIC4.51□□□□□ -1.69
ZIC3O60481 AC007349.4-201ENST00000608114 532 ntBASIC4.51□□□□□ -1.69
ZIC3O60481 AP001521.2-201ENST00000608772 546 ntBASIC4.51□□□□□ -1.69
ZIC3O60481 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.51□□□□□ -1.69
ZIC3O60481 AL122125.1-201ENST00000616999 600 ntBASIC4.51□□□□□ -1.69
ZIC3O60481 AL158163.2-201ENST00000619110 700 ntBASIC4.51□□□□□ -1.69
ZIC3O60481 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.51□□□□□ -1.69
ZIC3O60481 MIR6730-201ENST00000622213 67 ntBASIC4.51□□□□□ -1.69
ZIC3O60481 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.51□□□□□ -1.69
ZIC3O60481 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
ZIC3O60481 AC019072.1-201ENST00000604535 1551 ntBASIC4.51□□□□□ -1.69
ZIC3O60481 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ZIC3O60481 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ZIC3O60481 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ZIC3O60481 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ZIC3O60481 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms