Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 RN7SKP33-201ENST00000410942 340 ntBASIC4.74□□□□□ -1.65
MSH4O15457 AC002524.1-201ENST00000411687 547 ntBASIC4.74□□□□□ -1.65
MSH4O15457 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.74□□□□□ -1.65
MSH4O15457 AC106901.1-201ENST00000425086 698 ntBASIC4.74□□□□□ -1.65
MSH4O15457 AC092017.2-201ENST00000427600 362 ntBASIC4.74□□□□□ -1.65
MSH4O15457 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.74□□□□□ -1.65
MSH4O15457 NUTF2P7-201ENST00000453086 375 ntBASIC4.74□□□□□ -1.65
MSH4O15457 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.74□□□□□ -1.65
MSH4O15457 RNA5SP246-201ENST00000458909 119 ntBASIC4.74□□□□□ -1.65
MSH4O15457 AC105918.1-201ENST00000474399 838 ntBASIC4.74□□□□□ -1.65
MSH4O15457 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
MSH4O15457 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.74□□□□□ -1.65
MSH4O15457 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
MSH4O15457 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.74□□□□□ -1.65
MSH4O15457 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.74□□□□□ -1.65
MSH4O15457 AP000859.1-201ENST00000525536 307 ntBASIC4.74□□□□□ -1.65
MSH4O15457 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.74□□□□□ -1.65
MSH4O15457 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
MSH4O15457 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.74□□□□□ -1.65
MSH4O15457 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.74□□□□□ -1.65
MSH4O15457 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.74□□□□□ -1.65
MSH4O15457 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.74□□□□□ -1.65
MSH4O15457 FAM60CP-201ENST00000591086 664 ntBASIC4.74□□□□□ -1.65
MSH4O15457 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.74□□□□□ -1.65
MSH4O15457 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
MSH4O15457 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
MSH4O15457 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
MSH4O15457 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
MSH4O15457 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
MSH4O15457 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
MSH4O15457 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.74□□□□□ -1.65
MSH4O15457 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
MSH4O15457 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
MSH4O15457 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
MSH4O15457 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
MSH4O15457 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
MSH4O15457 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
MSH4O15457 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
MSH4O15457 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
MSH4O15457 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
MSH4O15457 IL6STP1-201ENST00000346911 1020 ntBASIC4.73□□□□□ -1.65
MSH4O15457 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.73□□□□□ -1.65
MSH4O15457 MIR1179-201ENST00000408703 91 ntBASIC4.73□□□□□ -1.65
MSH4O15457 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.73□□□□□ -1.65
MSH4O15457 AL590806.1-201ENST00000415818 853 ntBASIC4.73□□□□□ -1.65
MSH4O15457 AL691447.1-201ENST00000419456 387 ntBASIC4.73□□□□□ -1.65
MSH4O15457 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.73□□□□□ -1.65
MSH4O15457 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.73□□□□□ -1.65
MSH4O15457 AC004975.1-201ENST00000428733 208 ntBASIC4.73□□□□□ -1.65
MSH4O15457 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.73□□□□□ -1.65
MSH4O15457 PRELID3BP10-201ENST00000431957 584 ntBASIC4.73□□□□□ -1.65
MSH4O15457 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.73□□□□□ -1.65
MSH4O15457 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.73□□□□□ -1.65
MSH4O15457 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.73□□□□□ -1.65
MSH4O15457 C1DP3-201ENST00000455013 423 ntBASIC4.73□□□□□ -1.65
MSH4O15457 IGBP1P5-201ENST00000507524 1000 ntBASIC4.73□□□□□ -1.65
MSH4O15457 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
MSH4O15457 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
MSH4O15457 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.73□□□□□ -1.65
MSH4O15457 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.73□□□□□ -1.65
MSH4O15457 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.73□□□□□ -1.65
MSH4O15457 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.73□□□□□ -1.65
MSH4O15457 AL591034.3-201ENST00000605511 685 ntBASIC4.73□□□□□ -1.65
MSH4O15457 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.73□□□□□ -1.65
MSH4O15457 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.73□□□□□ -1.65
MSH4O15457 MIR492-201ENST00000638676 116 ntBASIC4.73□□□□□ -1.65
MSH4O15457 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
MSH4O15457 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
MSH4O15457 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.73□□□□□ -1.65
MSH4O15457 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
MSH4O15457 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
MSH4O15457 AC107021.2-201ENST00000567714 2095 ntBASIC4.73□□□□□ -1.65
MSH4O15457 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.72□□□□□ -1.65
MSH4O15457 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.72□□□□□ -1.65
MSH4O15457 SAMMSON-213ENST00000641336 1521 ntBASIC4.72□□□□□ -1.65
MSH4O15457 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
MSH4O15457 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
MSH4O15457 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.72□□□□□ -1.65
MSH4O15457 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
MSH4O15457 RNU6-386P-201ENST00000362650 107 ntBASIC4.72□□□□□ -1.65
MSH4O15457 RNU6-891P-201ENST00000384280 111 ntBASIC4.72□□□□□ -1.65
MSH4O15457 RNU6-729P-201ENST00000384399 107 ntBASIC4.72□□□□□ -1.65
MSH4O15457 RNU6-1320P-201ENST00000390838 107 ntBASIC4.72□□□□□ -1.65
MSH4O15457 RNU6-1269P-201ENST00000391139 107 ntBASIC4.72□□□□□ -1.65
MSH4O15457 RPS26P8-201ENST00000393490 348 ntBASIC4.72□□□□□ -1.65
MSH4O15457 OR8G2P-201ENST00000412796 908 ntBASIC4.72□□□□□ -1.65
MSH4O15457 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.72□□□□□ -1.65
MSH4O15457 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
MSH4O15457 RPS23P10-201ENST00000416185 486 ntBASIC4.72□□□□□ -1.65
MSH4O15457 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.72□□□□□ -1.65
MSH4O15457 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.72□□□□□ -1.65
MSH4O15457 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.72□□□□□ -1.65
MSH4O15457 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.72□□□□□ -1.65
MSH4O15457 RNU6-599P-201ENST00000459383 107 ntBASIC4.72□□□□□ -1.65
MSH4O15457 RNU6-1193P-201ENST00000459461 107 ntBASIC4.72□□□□□ -1.65
MSH4O15457 AC022336.1-201ENST00000475510 337 ntBASIC4.72□□□□□ -1.65
MSH4O15457 AC093824.1-201ENST00000508796 343 ntBASIC4.72□□□□□ -1.65
MSH4O15457 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.72□□□□□ -1.65
MSH4O15457 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.72□□□□□ -1.65
MSH4O15457 OR10D4P-201ENST00000525892 951 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 220.9 ms