Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 AP000567.1-201ENST00000406413 156 ntBASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 RNU6ATAC18P-201ENST00000408413 101 ntBASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 AP000357.1-201ENST00000409926 1165 ntBASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 AL139158.1-201ENST00000424719 340 ntBASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 CYCSP6-201ENST00000434498 302 ntBASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 PTGES3P5-201ENST00000455109 434 ntBASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 PPIAP19-201ENST00000486414 492 ntBASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 AC021146.5-201ENST00000503544 545 ntBASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 HAUS1P1-201ENST00000505275 832 ntBASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 AC112484.3-201ENST00000505910 329 ntBASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 COX6B1P5-201ENST00000509843 249 ntBASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 OR5M2P-201ENST00000529003 936 ntBASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 AL133457.1-201ENST00000564251 987 ntBASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 MRPS35P3-201ENST00000603189 709 ntBASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 AP000255.1-201ENST00000610276 676 ntBASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 FAM27B-201ENST00000610601 213 ntBASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 AL022401.1-201ENST00000619498 108 ntBASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 AP003400.2-201ENST00000624036 666 ntBASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
CHKB-CPT1BH3BT56 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC2.28□□□□□ -2.05
CHKB-CPT1BH3BT56 AL132640.2-201ENST00000559968 1698 ntBASIC2.28□□□□□ -2.05
CHKB-CPT1BH3BT56 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.05
CHKB-CPT1BH3BT56 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC2.28□□□□□ -2.05
CHKB-CPT1BH3BT56 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
CHKB-CPT1BH3BT56 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AC010132.2-201ENST00000295493 1043 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 RNA5SP151-201ENST00000365632 117 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 BPHL-201ENST00000380368 797 ntTSL 5 BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 MIR92A2-201ENST00000385299 75 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 HMGB1P10-201ENST00000395823 563 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 RNA5SP198-201ENST00000410376 127 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 PRELID3BP11-201ENST00000414230 479 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 DDX39BP1-205ENST00000422507 192 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AL132765.1-201ENST00000434165 553 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 PNKDP1-201ENST00000435914 430 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AL138899.2-201ENST00000439139 499 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 VN1R25P-201ENST00000443385 738 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AP006222.1-205ENST00000450734 457 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 ISCUP1-201ENST00000454451 448 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 VN1R40P-201ENST00000455196 941 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 EIF4A2P4-201ENST00000458691 1196 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 RPS27P29-201ENST00000463110 252 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 RPS12P20-201ENST00000464109 380 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms