Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 AC020914.4-201ENST00000597690 277 ntBASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 HMGB1P50-201ENST00000605814 607 ntBASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 AC116651.1-201ENST00000609724 556 ntBASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 AP006248.2-201ENST00000623309 592 ntBASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 AC093311.1-201ENST00000506586 2021 ntBASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 USP9YP4-201ENST00000424401 1745 ntBASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 NOL8P1-201ENST00000508336 3529 ntBASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 OR11H5P-202ENST00000641612 1325 ntBASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 AC103591.2-201ENST00000265259 766 ntBASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 MIR192-201ENST00000384915 110 ntBASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 MIR129-1-201ENST00000384972 72 ntBASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 RPS4XP9-201ENST00000405151 780 ntBASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 RN7SKP167-201ENST00000411047 285 ntBASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 ARAFP1-201ENST00000422172 605 ntBASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 SEC63P1-201ENST00000425785 1258 ntBASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 OR52A4P-201ENST00000472867 958 ntBASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 RPL23AP72-201ENST00000492447 435 ntBASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 AC018797.3-201ENST00000513388 1241 ntBASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 AP001804.2-201ENST00000533932 910 ntBASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 AC084783.1-201ENST00000565846 910 ntBASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 MIR4443-201ENST00000585052 53 ntBASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 AP001160.4-201ENST00000596971 382 ntBASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 AC115286.1-201ENST00000604298 434 ntBASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 Z98200.1-201ENST00000607298 470 ntBASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 AC019193.2-201ENST00000610012 634 ntBASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 AC073342.3-201ENST00000624211 193 ntBASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 OR2L1P-202ENST00000641567 1023 ntBASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 MAPK10-253ENST00000641010 4072 ntBASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 AL451142.2-201ENST00000429076 2090 ntBASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
HLA-DRB4X5D2U9 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 RAD17P1-201ENST00000418130 2042 ntBASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 MIR3074-201ENST00000384885 81 ntBASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 AL138878.1-201ENST00000405131 347 ntBASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 AC069213.2-201ENST00000420238 366 ntBASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 AC006065.1-201ENST00000422539 802 ntBASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 RPL7AP25-201ENST00000423357 805 ntBASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 AL132765.1-201ENST00000434165 553 ntBASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 RPL12P46-201ENST00000436610 195 ntBASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 AC114495.1-201ENST00000441274 436 ntBASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 TXNP2-201ENST00000443918 295 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms