Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 HYKK-202ENST00000408962 847 ntTSL 5 BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 AC008280.1-201ENST00000418851 412 ntBASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 MTCYBP31-201ENST00000438855 1122 ntBASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 NDUFA5P7-201ENST00000452914 242 ntBASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 NF1P3-201ENST00000457709 450 ntBASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 RPL5P24-201ENST00000463742 885 ntBASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 RPS21P4-201ENST00000487122 248 ntBASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 RNU5A-4P-201ENST00000516588 111 ntBASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 AC027308.1-201ENST00000517993 110 ntBASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 HMGB1P40-201ENST00000525121 540 ntBASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 NBEAP1-201ENST00000554452 979 ntBASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 AC090515.3-201ENST00000560431 315 ntBASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 GTF2IP8-201ENST00000560687 584 ntBASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 HYKK-203ENST00000563233 734 ntTSL 2 BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 MIR4512-201ENST00000583257 77 ntBASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 AP000769.2-201ENST00000602344 396 ntBASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 Z99289.3-201ENST00000605586 594 ntBASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 AC107075.1-201ENST00000613695 314 ntBASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 AC135068.5-201ENST00000624197 983 ntBASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
COL4A3BPQ9Y5P4 CYP1D1P-201ENST00000416662 1433 ntBASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 AP001029.2-203ENST00000589795 4910 ntBASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 AC011155.1-201ENST00000316512 456 ntBASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 TAF9BP1-201ENST00000396646 746 ntBASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 DBIP1-201ENST00000401435 260 ntBASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 MTND2P16-201ENST00000419987 799 ntBASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 AC010881.1-201ENST00000433830 235 ntBASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 RPL23AP76-201ENST00000441860 458 ntBASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 RFC5P1-201ENST00000454419 874 ntBASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 RN7SL172P-201ENST00000460535 303 ntBASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 AC092754.1-201ENST00000472975 479 ntBASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 MTND2P14-201ENST00000482139 351 ntBASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 AC025674.1-201ENST00000507074 324 ntBASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 HIGD1AP14-201ENST00000507617 282 ntBASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 AC138938.1-201ENST00000515431 782 ntBASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 AL671862.1-201ENST00000515851 349 ntBASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 SNORA3.4-201ENST00000515969 96 ntBASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 AC016180.1-201ENST00000567945 403 ntBASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 RN7SL356P-201ENST00000582228 248 ntBASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 AC090948.2-201ENST00000607363 564 ntBASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 AC231759.1-201ENST00000616455 597 ntBASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 AC109583.2-201ENST00000617367 129 ntBASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 MIR6864-201ENST00000617935 70 ntBASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 AP002791.1-201ENST00000623291 381 ntBASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms