Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS4AQ9UN37 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS4AQ9UN37 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
VPS4AQ9UN37 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS4AQ9UN37 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS4AQ9UN37 RAB28P1-201ENST00000411517 641 ntBASIC5.12□□□□□ -1.59
VPS4AQ9UN37 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS4AQ9UN37 AC016397.1-201ENST00000412463 242 ntBASIC5.12□□□□□ -1.59
VPS4AQ9UN37 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS4AQ9UN37 AL807761.1-201ENST00000417622 171 ntBASIC5.12□□□□□ -1.59
VPS4AQ9UN37 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS4AQ9UN37 AP001324.1-201ENST00000428553 399 ntBASIC5.12□□□□□ -1.59
VPS4AQ9UN37 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS4AQ9UN37 FTH1P16-201ENST00000435241 552 ntBASIC5.12□□□□□ -1.59
VPS4AQ9UN37 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS4AQ9UN37 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS4AQ9UN37 NPM1P33-201ENST00000438918 872 ntBASIC5.12□□□□□ -1.59
VPS4AQ9UN37 MTND2P22-201ENST00000444325 1033 ntBASIC5.12□□□□□ -1.59
VPS4AQ9UN37 TPT1P13-201ENST00000449760 499 ntBASIC5.12□□□□□ -1.59
VPS4AQ9UN37 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
VPS4AQ9UN37 AC092754.1-201ENST00000472975 479 ntBASIC5.12□□□□□ -1.59
VPS4AQ9UN37 RPS24P16-201ENST00000497294 392 ntBASIC5.12□□□□□ -1.59
VPS4AQ9UN37 AC034244.1-201ENST00000507687 207 ntBASIC5.12□□□□□ -1.59
VPS4AQ9UN37 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS4AQ9UN37 RPS27AP18-201ENST00000515536 459 ntBASIC5.12□□□□□ -1.59
VPS4AQ9UN37 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS4AQ9UN37 OSBPL9P5-201ENST00000542581 171 ntBASIC5.12□□□□□ -1.59
VPS4AQ9UN37 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS4AQ9UN37 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS4AQ9UN37 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS4AQ9UN37 OR1F2P-201ENST00000570470 933 ntBASIC5.12□□□□□ -1.59
VPS4AQ9UN37 MTCO1P40-201ENST00000574371 625 ntBASIC5.12□□□□□ -1.59
VPS4AQ9UN37 AC124856.1-201ENST00000600819 896 ntBASIC5.12□□□□□ -1.59
VPS4AQ9UN37 AC021171.1-201ENST00000603137 706 ntBASIC5.12□□□□□ -1.59
VPS4AQ9UN37 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS4AQ9UN37 AC109583.2-201ENST00000617367 129 ntBASIC5.12□□□□□ -1.59
VPS4AQ9UN37 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS4AQ9UN37 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS4AQ9UN37 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS4AQ9UN37 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS4AQ9UN37 AC109454.4-201ENST00000623411 649 ntBASIC5.12□□□□□ -1.59
VPS4AQ9UN37 AC026422.1-201ENST00000623961 452 ntBASIC5.12□□□□□ -1.59
VPS4AQ9UN37 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS4AQ9UN37 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS4AQ9UN37 BTBD10P1-201ENST00000549824 1352 ntBASIC5.12□□□□□ -1.59
VPS4AQ9UN37 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS4AQ9UN37 RBPJP2-201ENST00000618187 1444 ntBASIC5.12□□□□□ -1.59
VPS4AQ9UN37 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS4AQ9UN37 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS4AQ9UN37 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.12□□□□□ -1.59
VPS4AQ9UN37 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS4AQ9UN37 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 SNORD116-8-201ENST00000384365 95 ntBASIC5.11□□□□□ -1.59
VPS4AQ9UN37 FABP12P1-201ENST00000401911 322 ntBASIC5.11□□□□□ -1.59
VPS4AQ9UN37 ERHP2-201ENST00000402323 299 ntBASIC5.11□□□□□ -1.59
VPS4AQ9UN37 FCF1P5-201ENST00000406490 482 ntBASIC5.11□□□□□ -1.59
VPS4AQ9UN37 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 AC093162.1-201ENST00000419682 124 ntBASIC5.11□□□□□ -1.59
VPS4AQ9UN37 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 FAM96AP1-201ENST00000430879 482 ntBASIC5.11□□□□□ -1.59
VPS4AQ9UN37 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 AC073648.4-201ENST00000442655 781 ntBASIC5.11□□□□□ -1.59
VPS4AQ9UN37 AC019185.1-201ENST00000442718 389 ntBASIC5.11□□□□□ -1.59
VPS4AQ9UN37 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 AC012512.1-201ENST00000446594 718 ntBASIC5.11□□□□□ -1.59
VPS4AQ9UN37 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 AP000942.1-201ENST00000463969 747 ntBASIC5.11□□□□□ -1.59
VPS4AQ9UN37 AC022133.1-201ENST00000490961 571 ntBASIC5.11□□□□□ -1.59
VPS4AQ9UN37 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 IMPA1P1-201ENST00000510718 842 ntBASIC5.11□□□□□ -1.59
VPS4AQ9UN37 HMGB1P1-201ENST00000522557 636 ntBASIC5.11□□□□□ -1.59
VPS4AQ9UN37 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 AC007834.2-201ENST00000536310 343 ntBASIC5.11□□□□□ -1.59
VPS4AQ9UN37 GSTP1P1-201ENST00000548078 319 ntBASIC5.11□□□□□ -1.59
VPS4AQ9UN37 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 PCNPP1-201ENST00000552501 511 ntBASIC5.11□□□□□ -1.59
VPS4AQ9UN37 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 AC018552.1-201ENST00000562099 811 ntBASIC5.11□□□□□ -1.59
VPS4AQ9UN37 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 MIR548Y-201ENST00000582739 110 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms