Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 RN7SL604P-201ENST00000492589 296 ntBASIC5.68□□□□□ -1.5
NPC1L1Q9UHC9 AC006499.6-201ENST00000511169 607 ntBASIC5.68□□□□□ -1.5
NPC1L1Q9UHC9 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.68□□□□□ -1.5
NPC1L1Q9UHC9 OR7E10P-201ENST00000526420 991 ntBASIC5.68□□□□□ -1.5
NPC1L1Q9UHC9 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.68□□□□□ -1.5
NPC1L1Q9UHC9 RN7SL176P-201ENST00000580352 264 ntBASIC5.68□□□□□ -1.5
NPC1L1Q9UHC9 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.68□□□□□ -1.5
NPC1L1Q9UHC9 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NPC1L1Q9UHC9 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.68□□□□□ -1.5
NPC1L1Q9UHC9 IPO5P1-202ENST00000600039 287 ntBASIC5.68□□□□□ -1.5
NPC1L1Q9UHC9 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.68□□□□□ -1.5
NPC1L1Q9UHC9 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.68□□□□□ -1.5
NPC1L1Q9UHC9 MIR7702-201ENST00000621931 59 ntBASIC5.68□□□□□ -1.5
NPC1L1Q9UHC9 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.68□□□□□ -1.5
NPC1L1Q9UHC9 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NPC1L1Q9UHC9 AL122126.1-201ENST00000546905 1318 ntBASIC5.68□□□□□ -1.5
NPC1L1Q9UHC9 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.68□□□□□ -1.5
NPC1L1Q9UHC9 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NPC1L1Q9UHC9 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
NPC1L1Q9UHC9 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
NPC1L1Q9UHC9 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
NPC1L1Q9UHC9 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NPC1L1Q9UHC9 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NPC1L1Q9UHC9 RNU4-44P-201ENST00000363050 141 ntBASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 OR6C71P-201ENST00000432580 913 ntBASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 RPL23AP46-201ENST00000438548 490 ntBASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 PPM1AP1-201ENST00000502740 1135 ntBASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 AC069240.1-201ENST00000548774 375 ntBASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 AC034105.4-201ENST00000568304 277 ntBASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 AC007599.1-201ENST00000568688 1174 ntBASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 AC022655.2-201ENST00000577280 318 ntBASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 AC005261.4-201ENST00000600047 1385 ntBASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 AC114878.2-201ENST00000604863 1251 ntBASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 AP005264.7-201ENST00000625003 745 ntBASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 AMZ2P2-201ENST00000406819 1057 ntBASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 AL139039.2-201ENST00000407436 479 ntBASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 GSTM3P2-201ENST00000412746 530 ntBASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 AL356095.1-201ENST00000417217 199 ntBASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 AL389915.1-201ENST00000422463 466 ntBASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 AC114755.5-201ENST00000447760 831 ntBASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 AC104849.1-201ENST00000462623 405 ntBASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 STMN1P2-201ENST00000508435 439 ntBASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 RN7SKP5-201ENST00000517045 272 ntBASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 MIR2116-201ENST00000517221 80 ntBASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 AC063950.1-201ENST00000552036 308 ntBASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 AC011270.1-201ENST00000558606 583 ntBASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 AP005901.4-201ENST00000577336 569 ntBASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 CCDC58P3-201ENST00000590792 430 ntBASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.67□□□□□ -1.5
NPC1L1Q9UHC9 AC116667.1-201ENST00000604855 2072 ntBASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 AC233968.1-201ENST00000611212 1300 ntBASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 AL359837.1-201ENST00000381357 287 ntBASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 TPT1P2-201ENST00000413105 503 ntBASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 EIF4EP1-201ENST00000422311 642 ntBASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 OR4C10P-201ENST00000434991 931 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms