Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
VAPAQ9P0L0 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VAPAQ9P0L0 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VAPAQ9P0L0 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VAPAQ9P0L0 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
VAPAQ9P0L0 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
VAPAQ9P0L0 AL034403.1-201ENST00000399414 885 ntBASIC4.05□□□□□ -1.76
VAPAQ9P0L0 AL607077.1-201ENST00000401718 499 ntBASIC4.05□□□□□ -1.76
VAPAQ9P0L0 AL645733.1-201ENST00000402250 217 ntBASIC4.05□□□□□ -1.76
VAPAQ9P0L0 RNA5SP39-201ENST00000411245 120 ntBASIC4.05□□□□□ -1.76
VAPAQ9P0L0 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.05□□□□□ -1.76
VAPAQ9P0L0 NANOGP6-201ENST00000429190 847 ntBASIC4.05□□□□□ -1.76
VAPAQ9P0L0 BX119904.1-201ENST00000432026 348 ntBASIC4.05□□□□□ -1.76
VAPAQ9P0L0 AL359265.2-201ENST00000434367 631 ntBASIC4.05□□□□□ -1.76
VAPAQ9P0L0 AC093716.1-201ENST00000435923 377 ntBASIC4.05□□□□□ -1.76
VAPAQ9P0L0 CACYBPP1-201ENST00000438592 684 ntBASIC4.05□□□□□ -1.76
VAPAQ9P0L0 ELOCP10-201ENST00000440624 327 ntBASIC4.05□□□□□ -1.76
VAPAQ9P0L0 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.05□□□□□ -1.76
VAPAQ9P0L0 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.05□□□□□ -1.76
VAPAQ9P0L0 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.05□□□□□ -1.76
VAPAQ9P0L0 NDUFS5P3-201ENST00000450668 321 ntBASIC4.05□□□□□ -1.76
VAPAQ9P0L0 RPL7P61-201ENST00000451721 751 ntBASIC4.05□□□□□ -1.76
VAPAQ9P0L0 AC017007.3-201ENST00000479865 435 ntBASIC4.05□□□□□ -1.76
VAPAQ9P0L0 AC006517.1-201ENST00000480485 328 ntBASIC4.05□□□□□ -1.76
VAPAQ9P0L0 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.05□□□□□ -1.76
VAPAQ9P0L0 AC139783.2-201ENST00000504847 1145 ntBASIC4.05□□□□□ -1.76
VAPAQ9P0L0 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.05□□□□□ -1.76
VAPAQ9P0L0 HNRNPKP5-201ENST00000515300 253 ntBASIC4.05□□□□□ -1.76
VAPAQ9P0L0 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.05□□□□□ -1.76
VAPAQ9P0L0 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.05□□□□□ -1.76
VAPAQ9P0L0 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.05□□□□□ -1.76
VAPAQ9P0L0 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VAPAQ9P0L0 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VAPAQ9P0L0 AC087888.1-201ENST00000550884 1254 ntBASIC4.05□□□□□ -1.76
VAPAQ9P0L0 AC090515.3-201ENST00000560431 315 ntBASIC4.05□□□□□ -1.76
VAPAQ9P0L0 AC115989.2-201ENST00000578640 563 ntBASIC4.05□□□□□ -1.76
VAPAQ9P0L0 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
VAPAQ9P0L0 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.05□□□□□ -1.76
VAPAQ9P0L0 OR7E18P-201ENST00000592589 702 ntBASIC4.05□□□□□ -1.76
VAPAQ9P0L0 AC123786.2-201ENST00000603459 275 ntBASIC4.05□□□□□ -1.76
VAPAQ9P0L0 ELOCP34-201ENST00000604436 327 ntBASIC4.05□□□□□ -1.76
VAPAQ9P0L0 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.05□□□□□ -1.76
VAPAQ9P0L0 AC078899.5-201ENST00000612475 178 ntBASIC4.05□□□□□ -1.76
VAPAQ9P0L0 AP005212.4-201ENST00000614206 710 ntBASIC4.05□□□□□ -1.76
VAPAQ9P0L0 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.05□□□□□ -1.76
VAPAQ9P0L0 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.05□□□□□ -1.76
VAPAQ9P0L0 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VAPAQ9P0L0 MIR6715B-201ENST00000637172 77 ntBASIC4.05□□□□□ -1.76
VAPAQ9P0L0 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VAPAQ9P0L0 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VAPAQ9P0L0 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.05□□□□□ -1.76
VAPAQ9P0L0 AC097504.1-201ENST00000515103 2415 ntBASIC4.05□□□□□ -1.76
VAPAQ9P0L0 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.05□□□□□ -1.76
VAPAQ9P0L0 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VAPAQ9P0L0 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VAPAQ9P0L0 Z73965.1-201ENST00000623412 2297 ntBASIC4.05□□□□□ -1.76
VAPAQ9P0L0 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
VAPAQ9P0L0 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.05□□□□□ -1.76
VAPAQ9P0L0 AC131971.1-201ENST00000332881 1482 ntBASIC4.05□□□□□ -1.76
VAPAQ9P0L0 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
VAPAQ9P0L0 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
VAPAQ9P0L0 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.04□□□□□ -1.76
VAPAQ9P0L0 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VAPAQ9P0L0 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
VAPAQ9P0L0 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
VAPAQ9P0L0 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.04□□□□□ -1.76
VAPAQ9P0L0 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VAPAQ9P0L0 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VAPAQ9P0L0 RNA5SP175-201ENST00000364275 119 ntBASIC4.04□□□□□ -1.76
VAPAQ9P0L0 AL034374.1-201ENST00000406329 351 ntBASIC4.04□□□□□ -1.76
VAPAQ9P0L0 RNA5SP306-201ENST00000411087 107 ntBASIC4.04□□□□□ -1.76
VAPAQ9P0L0 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.04□□□□□ -1.76
VAPAQ9P0L0 TRIM60P17-201ENST00000415181 719 ntBASIC4.04□□□□□ -1.76
VAPAQ9P0L0 UQCRBP1-201ENST00000421129 336 ntBASIC4.04□□□□□ -1.76
VAPAQ9P0L0 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.04□□□□□ -1.76
VAPAQ9P0L0 AL158073.1-201ENST00000426848 1104 ntBASIC4.04□□□□□ -1.76
VAPAQ9P0L0 RPL23AP89-201ENST00000439324 255 ntBASIC4.04□□□□□ -1.76
VAPAQ9P0L0 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.04□□□□□ -1.76
VAPAQ9P0L0 AC092324.1-201ENST00000468671 324 ntBASIC4.04□□□□□ -1.76
VAPAQ9P0L0 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.04□□□□□ -1.76
VAPAQ9P0L0 RPL23AP2-201ENST00000471227 466 ntBASIC4.04□□□□□ -1.76
VAPAQ9P0L0 HAUS1P1-201ENST00000505275 832 ntBASIC4.04□□□□□ -1.76
VAPAQ9P0L0 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.04□□□□□ -1.76
VAPAQ9P0L0 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.04□□□□□ -1.76
VAPAQ9P0L0 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.04□□□□□ -1.76
VAPAQ9P0L0 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VAPAQ9P0L0 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
VAPAQ9P0L0 AC068446.3-201ENST00000555285 382 ntBASIC4.04□□□□□ -1.76
VAPAQ9P0L0 AC069061.3-201ENST00000582254 823 ntBASIC4.04□□□□□ -1.76
VAPAQ9P0L0 AC034236.3-201ENST00000605999 461 ntBASIC4.04□□□□□ -1.76
VAPAQ9P0L0 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.04□□□□□ -1.76
VAPAQ9P0L0 SDR42E1P1-201ENST00000611327 477 ntBASIC4.04□□□□□ -1.76
VAPAQ9P0L0 MIR7155-201ENST00000615925 56 ntBASIC4.04□□□□□ -1.76
VAPAQ9P0L0 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.04□□□□□ -1.76
VAPAQ9P0L0 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.04□□□□□ -1.76
VAPAQ9P0L0 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VAPAQ9P0L0 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VAPAQ9P0L0 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
VAPAQ9P0L0 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
VAPAQ9P0L0 PNPT1P2-201ENST00000456768 2050 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms