Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 AL590139.1-201ENST00000416267 400 ntBASIC4.7□□□□□ -1.66
SIX2Q9NPC8 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 SETP9-201ENST00000423837 832 ntBASIC4.7□□□□□ -1.66
SIX2Q9NPC8 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 MRPL50P1-201ENST00000431951 384 ntBASIC4.7□□□□□ -1.66
SIX2Q9NPC8 AC006466.1-201ENST00000438721 289 ntBASIC4.7□□□□□ -1.66
SIX2Q9NPC8 AL645937.3-201ENST00000453647 936 ntBASIC4.7□□□□□ -1.66
SIX2Q9NPC8 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 RN7SL610P-201ENST00000463845 291 ntBASIC4.7□□□□□ -1.66
SIX2Q9NPC8 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 AC138701.1-201ENST00000524329 714 ntBASIC4.7□□□□□ -1.66
SIX2Q9NPC8 AC068831.4-201ENST00000556118 109 ntBASIC4.7□□□□□ -1.66
SIX2Q9NPC8 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 DPRXP4-201ENST00000578053 568 ntBASIC4.7□□□□□ -1.66
SIX2Q9NPC8 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 MIR4760-201ENST00000585040 80 ntBASIC4.7□□□□□ -1.66
SIX2Q9NPC8 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 AC245884.10-201ENST00000597355 337 ntBASIC4.7□□□□□ -1.66
SIX2Q9NPC8 MTCO3P22-201ENST00000603219 784 ntBASIC4.7□□□□□ -1.66
SIX2Q9NPC8 RPAP2P1-201ENST00000603626 1168 ntBASIC4.7□□□□□ -1.66
SIX2Q9NPC8 AC015849.2-201ENST00000605738 409 ntBASIC4.7□□□□□ -1.66
SIX2Q9NPC8 AF129408.1-201ENST00000608767 431 ntBASIC4.7□□□□□ -1.66
SIX2Q9NPC8 AC016597.2-201ENST00000613256 341 ntBASIC4.7□□□□□ -1.66
SIX2Q9NPC8 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 MIR1264-201ENST00000616374 69 ntBASIC4.7□□□□□ -1.66
SIX2Q9NPC8 AL133370.2-201ENST00000619934 439 ntBASIC4.7□□□□□ -1.66
SIX2Q9NPC8 AL669942.2-201ENST00000620352 697 ntBASIC4.7□□□□□ -1.66
SIX2Q9NPC8 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 AP000542.2-201ENST00000623199 6179 ntBASIC4.7□□□□□ -1.66
SIX2Q9NPC8 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.69□□□□□ -1.66
SIX2Q9NPC8 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SIX2Q9NPC8 AC093849.1-201ENST00000563631 2209 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SIX2Q9NPC8 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SIX2Q9NPC8 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SIX2Q9NPC8 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
SIX2Q9NPC8 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.69□□□□□ -1.66
SIX2Q9NPC8 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SIX2Q9NPC8 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SIX2Q9NPC8 RNU1-108P-201ENST00000362556 161 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 MIR129-1-201ENST00000384972 72 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SIX2Q9NPC8 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SIX2Q9NPC8 NPM1P38-201ENST00000403835 865 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 AC069282.1-201ENST00000411911 526 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SIX2Q9NPC8 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.69□□□□□ -1.66
SIX2Q9NPC8 SFR1P2-201ENST00000421841 730 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 BRWD1P3-201ENST00000428816 390 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 PRELID3BP10-201ENST00000431957 584 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SIX2Q9NPC8 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SIX2Q9NPC8 MOB1AP2-201ENST00000446060 614 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 ARL2BPP10-201ENST00000446487 531 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 MTND6P5-201ENST00000448266 512 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 CLIC4P1-201ENST00000453177 535 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 TVP23BP2-201ENST00000455082 615 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 RPL7P22-201ENST00000466005 733 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 AC022795.1-201ENST00000473808 480 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 NPM1P17-201ENST00000479221 602 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 RN7SL205P-201ENST00000490174 284 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 RPS27AP16-201ENST00000492222 470 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 RPL23AP72-201ENST00000492447 435 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 RPS26P24-201ENST00000497656 331 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 PPBPP1-201ENST00000510807 373 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.69□□□□□ -1.66
SIX2Q9NPC8 RNU6-334P-201ENST00000517072 102 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
SIX2Q9NPC8 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.69□□□□□ -1.66
SIX2Q9NPC8 PHBP17-201ENST00000528576 541 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 UBTFL9-201ENST00000534504 1148 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 AC093014.1-201ENST00000548926 724 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 AL352979.3-201ENST00000553515 247 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.69□□□□□ -1.66
SIX2Q9NPC8 AL121834.1-201ENST00000572284 509 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.69□□□□□ -1.66
SIX2Q9NPC8 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.69□□□□□ -1.66
SIX2Q9NPC8 RPL12P25-202ENST00000598100 674 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms